Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_20195

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
4,660,435	-		CA264_20185	0.75	+0.6
4,660,460	+		CA264_20185	0.79	-0.1
4,660,463	-		CA264_20185	0.79	-1.1
4,660,463	-		CA264_20185	0.79	+0.4
4,660,463	-		CA264_20185	0.79	+0.2
4,660,465	+		CA264_20185	0.79	+0.2
4,660,465	+		CA264_20185	0.79	-0.3
4,660,465	+		CA264_20185	0.79	+0.7
4,660,466	-		CA264_20185	0.80	+0.1
4,660,575	+				+1.1
4,660,576	-				-1.9
4,660,576	-				-0.3
4,660,577	+				-0.3
4,660,577	+				-0.6
4,660,578	-				+0.2
4,660,578	-				-1.6
4,660,592	+				+0.1
4,660,593	-				+0.3
4,660,644	+				-1.6
4,660,644	+				+0.4
4,660,644	+				-0.1
4,660,644	+				-0.1
4,660,645	-				+0.5
4,660,645	-				-1.3
4,660,645	-				-0.6
4,660,645	-				+0.1
4,660,645	-				-2.0
4,660,647	-				-0.7
4,660,649	-				-1.1
4,660,668	-		CA264_20190	0.11	-0.2
4,660,679	+		CA264_20190	0.12	+0.3
4,660,680	-		CA264_20190	0.12	-0.8
4,660,858	-		CA264_20190	0.36	+0.1
4,660,901	+		CA264_20190	0.42	-0.9
4,660,902	-		CA264_20190	0.42	-0.4
4,660,902	-		CA264_20190	0.42	+1.6
4,660,902	-		CA264_20190	0.42	-0.4
4,660,953	-		CA264_20190	0.49	-0.2
4,660,981	-		CA264_20190	0.53	-0.1
4,661,065	+		CA264_20190	0.64	+0.2
4,661,065	+		CA264_20190	0.64	-0.9
4,661,065	+		CA264_20190	0.64	+0.4
4,661,066	-		CA264_20190	0.64	-1.0
4,661,066	-		CA264_20190	0.64	+0.4
4,661,076	+		CA264_20190	0.66	-0.2
4,661,076	+		CA264_20190	0.66	-0.2
4,661,076	+		CA264_20190	0.66	-0.5
4,661,077	-		CA264_20190	0.66	+0.8
4,661,077	-		CA264_20190	0.66	-1.0
4,661,077	-		CA264_20190	0.66	+0.0
4,661,079	-		CA264_20190	0.66	-0.8
4,661,098	-		CA264_20190	0.69	-0.6
4,661,127	+		CA264_20190	0.73	-0.6
4,661,296	+				-0.0
4,661,316	-				+0.5
4,661,333	+				-0.0
4,661,334	-				+0.1
4,661,420	-				-0.5
4,661,589	+		CA264_20195	0.18	+1.2
4,661,653	+		CA264_20195	0.24	+0.2
4,661,654	-		CA264_20195	0.24	+1.2
4,661,660	+		CA264_20195	0.24	+0.4
4,661,660	+		CA264_20195	0.24	+1.5
4,661,661	-		CA264_20195	0.25	-0.6
4,661,662	+		CA264_20195	0.25	+0.2
4,661,673	-		CA264_20195	0.26	-0.6
4,661,782	-		CA264_20195	0.36	-0.0
4,661,804	+		CA264_20195	0.38	-0.1
4,661,804	+		CA264_20195	0.38	+0.0
4,661,857	+		CA264_20195	0.43	+0.3
4,661,857	+		CA264_20195	0.43	+0.4
4,661,858	-		CA264_20195	0.43	+0.5
4,661,860	-		CA264_20195	0.43	+0.7
4,661,889	+		CA264_20195	0.46	-0.6
4,661,889	+		CA264_20195	0.46	+0.8
4,661,889	+		CA264_20195	0.46	-0.4
4,661,889	+		CA264_20195	0.46	-0.5
4,661,890	-		CA264_20195	0.46	-0.9
4,661,894	+		CA264_20195	0.47	+0.3
4,661,895	-		CA264_20195	0.47	+0.5
4,661,908	+		CA264_20195	0.48	+0.0
4,661,912	+		CA264_20195	0.48	+0.6
4,661,912	+		CA264_20195	0.48	-0.1
4,661,970	-		CA264_20195	0.54	+0.5
4,661,994	+		CA264_20195	0.56	-0.2
4,662,110	-		CA264_20195	0.67	-0.6
4,662,126	-		CA264_20195	0.68	-0.1
4,662,202	-		CA264_20195	0.76	-1.4
4,662,202	-		CA264_20195	0.76	-1.2
4,662,231	+		CA264_20195	0.78	+0.3
4,662,232	-		CA264_20195	0.78	-0.2
4,662,273	-		CA264_20195	0.82	-0.5
4,662,273	-		CA264_20195	0.82	+0.2
4,662,277	+		CA264_20195	0.83	-0.2
4,662,278	-		CA264_20195	0.83	+0.2
4,662,282	-		CA264_20195	0.83	-0.0
4,662,282	-		CA264_20195	0.83	+0.3
4,662,340	+		CA264_20195	0.89	+0.4
4,662,340	+		CA264_20195	0.89	+1.2
4,662,340	+		CA264_20195	0.89	-0.4
4,662,340	+		CA264_20195	0.89	+1.6
4,662,355	-				-0.4
4,662,361	-				-0.6
4,662,416	+				-0.7
4,662,453	-				-0.2
4,662,453	-				+0.2
4,662,453	-				-2.2
4,662,453	-				-0.1
4,662,463	+				-0.1
4,662,464	-				-0.6
4,662,561	+				-1.3
4,662,562	-				+1.6
4,662,563	+				+0.2
4,662,563	+				-2.1
4,662,564	-				-0.8
4,662,567	+				-0.5
4,662,567	+				-0.9
4,662,568	-				-1.1
4,662,600	+				-0.7
4,662,601	-				-0.4
4,662,634	+				+0.3
4,662,653	-				-1.8
4,662,653	-				-0.6
4,662,670	+				-1.0
4,662,670	+				-0.9
4,662,670	+				-0.6
4,662,671	-				-0.7
4,662,671	-				-0.5
4,662,671	-				-1.0
4,662,671	-				-1.6
4,662,681	-				-0.4
4,662,688	-				+0.8
4,662,698	-				+0.5
4,662,717	+				-1.4
4,662,718	-				-0.5
4,662,718	-				+0.0
4,662,759	+		CA264_20200	0.11	+1.6
4,662,853	-		CA264_20200	0.17	-1.4
4,662,917	-		CA264_20200	0.21	+0.8
4,662,925	+		CA264_20200	0.22	-0.3
4,662,926	-		CA264_20200	0.22	-1.0
4,662,926	-		CA264_20200	0.22	-1.1
4,663,039	-		CA264_20200	0.29	+0.3
4,663,079	+		CA264_20200	0.32	+0.5
4,663,080	-		CA264_20200	0.32	-1.4
4,663,080	-		CA264_20200	0.32	-0.0
4,663,080	-		CA264_20200	0.32	-0.4
4,663,106	+		CA264_20200	0.34	-0.4
4,663,113	+		CA264_20200	0.34	+0.2
4,663,114	-		CA264_20200	0.34	+0.2
4,663,362	+		CA264_20200	0.50	-0.8
4,663,362	+		CA264_20200	0.50	-0.6
4,663,362	+		CA264_20200	0.50	+0.0
4,663,363	-		CA264_20200	0.51	-0.3
4,663,363	-		CA264_20200	0.51	-0.5
4,663,367	+		CA264_20200	0.51	-0.8
4,663,368	-		CA264_20200	0.51	+0.2
4,663,368	-		CA264_20200	0.51	-0.9
4,663,368	-		CA264_20200	0.51	-0.5
4,663,442	-		CA264_20200	0.56	-1.0