Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16965

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
3,948,109	-		CA264_16960	0.43	-1.2
3,948,153	+		CA264_16960	0.46	+0.3
3,948,153	+		CA264_16960	0.46	+0.7
3,948,154	-		CA264_16960	0.46	-0.6
3,948,154	-		CA264_16960	0.46	-1.4
3,948,279	+		CA264_16960	0.54	+0.3
3,948,280	-		CA264_16960	0.54	-1.5
3,948,408	+		CA264_16960	0.62	-0.2
3,948,473	+		CA264_16960	0.67	-0.6
3,948,474	-		CA264_16960	0.67	-1.4
3,948,521	-		CA264_16960	0.70	-0.1
3,948,535	+		CA264_16960	0.71	+0.0
3,948,601	+		CA264_16960	0.75	+0.3
3,948,640	-		CA264_16960	0.78	+0.2
3,948,657	+		CA264_16960	0.79	+0.7
3,948,657	+		CA264_16960	0.79	-0.4
3,948,657	+		CA264_16960	0.79	-0.1
3,948,658	-		CA264_16960	0.79	-0.4
3,948,658	-		CA264_16960	0.79	-1.0
3,948,664	+		CA264_16960	0.80	-1.5
3,948,665	-		CA264_16960	0.80	-0.3
3,948,676	+		CA264_16960	0.80	+0.5
3,948,677	-		CA264_16960	0.80	-1.6
3,948,691	+		CA264_16960	0.81	+0.3
3,948,696	-		CA264_16960	0.82	+0.1
3,948,722	-		CA264_16960	0.83	-0.3
3,948,722	-		CA264_16960	0.83	-0.8
3,948,722	-		CA264_16960	0.83	-1.2
3,948,722	-		CA264_16960	0.83	-0.2
3,948,733	+		CA264_16960	0.84	+0.1
3,948,771	+		CA264_16960	0.87	-0.0
3,948,771	+		CA264_16960	0.87	-0.1
3,948,772	-		CA264_16960	0.87	-1.5
3,948,772	-		CA264_16960	0.87	-1.9
3,948,777	-		CA264_16960	0.87	-1.2
3,948,886	+				+0.3
3,948,886	+				-0.0
3,948,909	+				+0.6
3,948,910	-				-0.3
3,948,990	-				-0.7
3,948,994	-				-0.6
3,948,994	-				-1.4
3,949,008	+				+0.6
3,949,012	+				+0.5
3,949,013	-				-0.7
3,949,014	+				-0.3
3,949,015	-				-0.5
3,949,127	-		CA264_16965	0.15	-0.0
3,949,170	-		CA264_16965	0.26	+0.4
3,949,173	+		CA264_16965	0.26	-0.4
3,949,173	+		CA264_16965	0.26	+0.3
3,949,173	+		CA264_16965	0.26	+1.3
3,949,237	-		CA264_16965	0.42	+0.3
3,949,249	+		CA264_16965	0.45	+0.6
3,949,330	-		CA264_16965	0.64	-0.3
3,949,349	+		CA264_16965	0.68	+0.4
3,949,349	+		CA264_16965	0.68	+0.3
3,949,350	-		CA264_16965	0.69	-0.0
3,949,350	-		CA264_16965	0.69	-0.7
3,949,383	+		CA264_16965	0.76	+0.2
3,949,383	+		CA264_16965	0.76	-0.1
3,949,462	-				+0.6
3,949,481	+				-0.1
3,949,482	-				+0.3
3,949,487	+				-0.7
3,949,487	+				-0.2
3,949,488	-				+0.2
3,949,541	+				+0.4
3,949,542	-				-0.6
3,949,543	+				+0.1
3,949,544	-				-0.5
3,949,544	-				+1.4
3,949,544	-				+0.1
3,949,544	-				+0.4
3,949,547	+				+0.7
3,949,547	+				-1.4
3,949,547	+				-0.1
3,949,548	-				-0.3
3,949,548	-				-0.7
3,949,549	+				-0.0
3,949,549	+				-0.2
3,949,550	-				-0.3
3,949,583	+				+1.4
3,949,595	-				-0.5
3,949,611	+				+0.7
3,949,612	-				+0.2
3,949,612	-				+0.2
3,949,615	+				-0.0
3,949,616	-				+0.9
3,949,643	-				-0.7
3,949,643	-				-1.2
3,949,643	-				+0.0
3,949,647	+				-0.5
3,949,656	-				-0.0
3,949,759	+				+0.3
3,949,760	-				+0.1
3,949,773	-				-0.2
3,950,045	+		CA264_16970	0.30	-0.5
3,950,063	+		CA264_16970	0.31	-0.1
3,950,063	+		CA264_16970	0.31	+0.5
3,950,064	-		CA264_16970	0.31	+0.8
3,950,076	-		CA264_16970	0.32	-1.1
3,950,120	+		CA264_16970	0.35	-0.7
3,950,120	+		CA264_16970	0.35	-0.3
3,950,121	-		CA264_16970	0.35	-0.4
3,950,121	-		CA264_16970	0.35	-0.0
3,950,130	+		CA264_16970	0.36	+0.1
3,950,155	-		CA264_16970	0.38	+0.3
3,950,155	-		CA264_16970	0.38	+0.6
3,950,174	-		CA264_16970	0.39	+0.1
3,950,204	-		CA264_16970	0.41	-1.6
3,950,262	+		CA264_16970	0.46	+0.4
3,950,277	+		CA264_16970	0.47	-0.2
3,950,278	-		CA264_16970	0.47	+0.6
3,950,334	+		CA264_16970	0.51	+0.4
3,950,335	-		CA264_16970	0.51	-2.2
3,950,466	+		CA264_16970	0.60	+0.2
3,950,470	+		CA264_16970	0.61	+0.8