Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16775

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
3,910,352	-		CA264_16765	0.82	+0.8
3,910,352	-		CA264_16765	0.82	+0.0
3,910,403	+		CA264_16765	0.87	+0.3
3,910,410	-		CA264_16765	0.87	-0.1
3,910,490	+				+0.2
3,910,551	-				+0.7
3,910,551	-				-0.6
3,910,562	+				-1.2
3,910,563	-				-0.6
3,910,563	-				-1.8
3,910,567	-				+0.3
3,910,568	+				-0.2
3,910,585	-				+0.5
3,910,601	+				+0.2
3,910,606	-				-0.2
3,910,608	-				+3.5
3,910,646	+				-1.2
3,910,656	+				+0.7
3,910,717	+				+0.8
3,910,718	-				-0.4
3,910,718	-				-0.3
3,910,720	-				+0.1
3,910,721	+				-1.4
3,910,721	+				+0.1
3,910,805	+		CA264_16770	0.15	+0.0
3,910,913	-		CA264_16770	0.47	-0.1
3,910,915	+		CA264_16770	0.47	-0.1
3,910,915	+		CA264_16770	0.47	-0.1
3,910,916	-		CA264_16770	0.48	-0.3
3,910,936	-		CA264_16770	0.54	-1.3
3,910,936	-		CA264_16770	0.54	-0.4
3,911,090	-				+0.3
3,911,141	-				+1.1
3,911,144	+				-0.1
3,911,144	+				-0.3
3,911,144	+				+0.0
3,911,144	+				-0.5
3,911,145	-				-0.4
3,911,146	+				-0.6
3,911,147	-				-0.9
3,911,189	-				-0.0
3,911,189	-				-0.4
3,911,316	+				-0.4
3,911,317	-				-1.2
3,911,320	+				-1.0
3,911,321	-				-0.0
3,911,321	-				-0.3
3,911,321	-				-0.2
3,911,323	-				-1.1
3,911,357	+				+0.6
3,911,361	-				+0.9
3,911,364	+				-0.1
3,911,380	-				+0.6
3,911,388	-				-0.5
3,911,472	+		CA264_16775	0.16	-0.1
3,911,532	+		CA264_16775	0.24	+0.1
3,911,532	+		CA264_16775	0.24	+0.5
3,911,533	-		CA264_16775	0.24	+0.9
3,911,533	-		CA264_16775	0.24	+0.2
3,911,617	+		CA264_16775	0.35	+0.8
3,911,617	+		CA264_16775	0.35	+0.4
3,911,618	-		CA264_16775	0.35	-0.8
3,911,621	+		CA264_16775	0.36	-2.2
3,911,622	-		CA264_16775	0.36	+0.4
3,911,622	-		CA264_16775	0.36	-0.8
3,911,622	-		CA264_16775	0.36	+0.0
3,911,771	+		CA264_16775	0.55	+0.2
3,911,800	-		CA264_16775	0.59	-0.9
3,911,844	+		CA264_16775	0.65	-0.0
3,911,845	-		CA264_16775	0.65	-0.3
3,911,893	+		CA264_16775	0.71	+0.5
3,911,977	+		CA264_16775	0.82	+1.1
3,911,991	+		CA264_16775	0.84	+0.2
3,911,992	-		CA264_16775	0.84	+0.5
3,912,120	-				+0.1
3,912,140	+				+0.9
3,912,141	-				-0.8
3,912,141	-				-0.9
3,912,161	+				+2.1
3,912,162	-				-1.9
3,912,162	-				-0.7
3,912,162	-				+0.6
3,912,169	+				-0.9
3,912,182	+				-0.5
3,912,233	+				+0.2
3,912,237	-				-0.0
3,912,394	+		CA264_16780	0.22	-0.2
3,912,394	+		CA264_16780	0.22	+0.9
3,912,394	+		CA264_16780	0.22	+0.7
3,912,395	-				+0.6
3,912,482	+		CA264_16780	0.31	-0.3
3,912,482	+		CA264_16780	0.31	-2.3
3,912,511	+		CA264_16780	0.34	-0.4
3,912,512	-		CA264_16780	0.35	+0.0
3,912,660	-		CA264_16780	0.50	-0.1
3,912,708	-		CA264_16780	0.55	-0.2
3,912,711	+		CA264_16780	0.55	+0.4
3,912,711	+		CA264_16780	0.55	-0.1
3,912,712	-		CA264_16780	0.55	-0.3
3,912,780	+		CA264_16780	0.63	-1.6
3,912,780	+		CA264_16780	0.63	-0.6
3,912,781	-		CA264_16780	0.63	-1.5
3,912,781	-		CA264_16780	0.63	+0.7
3,912,784	+		CA264_16780	0.63	-0.5
3,912,873	+		CA264_16780	0.72	-0.9
3,912,873	+		CA264_16780	0.72	-0.2
3,912,874	-		CA264_16780	0.72	-0.9
3,912,874	-		CA264_16780	0.72	-0.7
3,912,874	-		CA264_16780	0.72	-0.7
3,912,875	+		CA264_16780	0.73	+0.8
3,912,875	+		CA264_16780	0.73	-0.3
3,912,876	-		CA264_16780	0.73	-0.7
3,912,876	-		CA264_16780	0.73	-0.7
3,912,927	+		CA264_16780	0.78	-0.2
3,912,965	+		CA264_16780	0.82	-0.3
3,912,966	-		CA264_16780	0.82	-0.3
3,912,966	-		CA264_16780	0.82	-0.4
3,913,030	+		CA264_16780	0.89	-0.4
3,913,031	-		CA264_16780	0.89	-0.3
3,913,032	+		CA264_16780	0.89	+1.1
3,913,079	-				-1.3
3,913,089	+				-0.1
3,913,090	-				+0.5