Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15005

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
3,519,756	+		CA264_14995	0.87	+1.3
3,519,757	-		CA264_14995	0.87	-0.1
3,519,804	-				+1.5
3,519,811	+				+0.8
3,519,862	+				+0.8
3,519,893	+				-0.1
3,519,893	+				+0.9
3,519,894	-				+1.0
3,519,947	+				-0.8
3,519,988	+				-0.1
3,519,989	-				+0.8
3,519,992	-				+0.7
3,519,992	-				+0.9
3,520,369	-		CA264_15000	0.75	-0.5
3,520,401	+		CA264_15000	0.82	+0.7
3,520,485	+				+0.2
3,520,486	-				+1.0
3,520,490	+				-0.1
3,520,490	+				-1.2
3,520,490	+				+1.8
3,520,491	-				+0.5
3,520,491	-				+0.5
3,520,491	-				+0.8
3,520,491	-				+1.1
3,520,522	+				-1.2
3,520,523	-				-1.3
3,520,548	-				-1.3
3,520,789	+		CA264_15005	0.13	+0.3
3,520,807	-		CA264_15005	0.14	-1.3
3,520,816	+		CA264_15005	0.15	-0.9
3,520,817	-		CA264_15005	0.15	-0.2
3,520,830	-		CA264_15005	0.16	+0.1
3,521,038	-		CA264_15005	0.32	-0.1
3,521,066	+		CA264_15005	0.35	+0.8
3,521,067	-		CA264_15005	0.35	-0.1
3,521,349	+		CA264_15005	0.57	-0.6
3,521,390	-		CA264_15005	0.61	-0.7
3,521,539	+		CA264_15005	0.72	-0.0
3,521,596	+		CA264_15005	0.77	+0.5
3,521,597	-		CA264_15005	0.77	-0.1
3,521,597	-		CA264_15005	0.77	-0.8
3,521,597	-		CA264_15005	0.77	-0.9
3,521,597	-		CA264_15005	0.77	-1.6
3,521,628	+		CA264_15005	0.80	-1.9
3,521,629	-		CA264_15005	0.80	-2.1
3,521,629	-		CA264_15005	0.80	-0.5
3,521,732	-		CA264_15005	0.88	-0.9
3,521,797	+				-1.0
3,521,868	-				-1.3
3,521,883	-				+0.3
3,521,944	-		CA264_15010	0.16	-2.0
3,521,965	-		CA264_15010	0.20	-0.2
3,521,995	-		CA264_15010	0.24	-0.2
3,522,021	+		CA264_15010	0.29	-2.9
3,522,022	-		CA264_15010	0.29	-1.8
3,522,092	+		CA264_15010	0.40	-1.9
3,522,098	+		CA264_15010	0.41	-1.4
3,522,098	+		CA264_15010	0.41	-0.6
3,522,102	+		CA264_15010	0.42	-1.9
3,522,135	+		CA264_15010	0.47	+0.6
3,522,316	-		CA264_15010	0.76	-1.4
3,522,356	-		CA264_15010	0.83	-2.9
3,522,456	-				-1.3
3,522,459	+				-0.3
3,522,460	-				+0.6
3,522,460	-				+0.2
3,522,509	+				+0.1
3,522,509	+				+0.0
3,522,554	+				+1.8
3,522,555	-				-0.1
3,522,569	+		CA264_15015	0.11	-1.2
3,522,630	+		CA264_15015	0.26	+1.3
3,522,630	+		CA264_15015	0.26	-0.5
3,522,631	-		CA264_15015	0.26	+0.1
3,522,653	+		CA264_15015	0.32	+0.5
3,522,657	+		CA264_15015	0.33	-0.1
3,522,657	+		CA264_15015	0.33	+0.0
3,522,657	+		CA264_15015	0.33	+0.3
3,522,657	+		CA264_15015	0.33	+0.2
3,522,658	-		CA264_15015	0.33	-0.2
3,522,658	-		CA264_15015	0.33	-0.2
3,522,661	+		CA264_15015	0.34	-0.4
3,522,662	-		CA264_15015	0.34	-0.3
3,522,664	+		CA264_15015	0.34	-0.2
3,522,665	-		CA264_15015	0.35	-0.5
3,522,689	+		CA264_15015	0.40	+1.0
3,522,690	-		CA264_15015	0.41	+1.0
3,522,713	+		CA264_15015	0.46	-0.6
3,522,737	-		CA264_15015	0.52	+0.0
3,522,744	+		CA264_15015	0.54	-0.4
3,522,745	-		CA264_15015	0.54	-0.1
3,522,747	+		CA264_15015	0.55	+0.8
3,522,748	-		CA264_15015	0.55	-0.7
3,522,753	-		CA264_15015	0.56	-0.9
3,522,757	+		CA264_15015	0.57	+0.1
3,522,757	+		CA264_15015	0.57	-0.2
3,522,757	+		CA264_15015	0.57	-0.6
3,522,757	+		CA264_15015	0.57	-0.3
3,522,757	+		CA264_15015	0.57	+0.6
3,522,757	+		CA264_15015	0.57	-0.3
3,522,758	-		CA264_15015	0.57	-0.6
3,522,758	-		CA264_15015	0.57	-1.3
3,522,758	-		CA264_15015	0.57	-0.0
3,522,758	-		CA264_15015	0.57	-0.0
3,522,758	-		CA264_15015	0.57	+1.2
3,522,759	+		CA264_15015	0.58	-1.2
3,522,760	-		CA264_15015	0.58	-0.1
3,522,763	+		CA264_15015	0.59	-0.4
3,522,763	+		CA264_15015	0.59	-1.6
3,522,764	-		CA264_15015	0.59	-0.0
3,522,764	-		CA264_15015	0.59	-0.8
3,522,764	-		CA264_15015	0.59	-0.3
3,522,792	-		CA264_15015	0.66	-1.0
3,522,792	-		CA264_15015	0.66	-0.2
3,522,808	+		CA264_15015	0.70	-0.7
3,522,865	-		CA264_15015	0.84	-0.8
3,522,865	-		CA264_15015	0.84	-0.1
3,522,868	+		CA264_15015	0.84	+0.1
3,522,868	+		CA264_15015	0.84	-0.1
3,522,869	-		CA264_15015	0.85	-0.6
3,522,869	-		CA264_15015	0.85	-0.9