Experiment: m.b. Doxycycline hyclate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10995 and CA264_11000 are separated by 2 nucleotides CA264_11000 and CA264_11005 are separated by 5 nucleotides CA264_11005 and CA264_11010 are separated by 65 nucleotides
CA264_10995: CA264_10995 - hypothetical protein, at 2,535,154 to 2,536,365
_10995
CA264_11000: CA264_11000 - methionyl-tRNA formyltransferase, at 2,536,368 to 2,537,297
_11000
CA264_11005: CA264_11005 - dihydrofolate reductase, at 2,537,303 to 2,537,788
_11005
CA264_11010: CA264_11010 - hypothetical protein, at 2,537,854 to 2,542,860
_11010
Position (kb)
2536
2537
2538 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2535.493 kb on - strand, within CA264_10995 at 2535.554 kb on + strand, within CA264_10995 at 2535.555 kb on - strand, within CA264_10995 at 2535.584 kb on + strand, within CA264_10995 at 2535.584 kb on + strand, within CA264_10995 at 2535.585 kb on - strand, within CA264_10995 at 2535.607 kb on + strand, within CA264_10995 at 2535.608 kb on - strand, within CA264_10995 at 2535.608 kb on - strand, within CA264_10995 at 2535.608 kb on - strand, within CA264_10995 at 2535.613 kb on + strand, within CA264_10995 at 2535.613 kb on + strand, within CA264_10995 at 2535.614 kb on - strand, within CA264_10995 at 2535.614 kb on - strand, within CA264_10995 at 2535.616 kb on - strand, within CA264_10995 at 2535.631 kb on + strand, within CA264_10995 at 2535.631 kb on + strand, within CA264_10995 at 2535.889 kb on + strand, within CA264_10995 at 2535.982 kb on - strand, within CA264_10995 at 2536.031 kb on - strand, within CA264_10995 at 2536.152 kb on - strand, within CA264_10995 at 2536.210 kb on - strand, within CA264_10995 at 2536.210 kb on - strand, within CA264_10995 at 2536.311 kb on - strand at 2536.318 kb on + strand at 2536.321 kb on - strand at 2536.340 kb on - strand at 2536.359 kb on + strand at 2536.363 kb on + strand at 2536.363 kb on + strand at 2536.363 kb on + strand at 2536.363 kb on + strand at 2536.367 kb on + strand at 2536.367 kb on + strand at 2536.367 kb on + strand at 2536.368 kb on - strand at 2536.368 kb on - strand at 2536.368 kb on - strand at 2537.294 kb on - strand at 2537.294 kb on - strand at 2537.303 kb on - strand at 2537.787 kb on - strand at 2537.787 kb on - strand at 2537.789 kb on + strand at 2537.790 kb on - strand at 2537.855 kb on + strand at 2537.855 kb on + strand at 2537.867 kb on + strand at 2537.874 kb on + strand at 2537.875 kb on - strand at 2537.963 kb on + strand at 2537.964 kb on - strand at 2537.990 kb on + strand at 2537.990 kb on + strand at 2537.990 kb on + strand at 2537.990 kb on + strand at 2538.015 kb on - strand at 2538.015 kb on - strand at 2538.015 kb on - strand at 2538.027 kb on + strand at 2538.027 kb on + strand at 2538.142 kb on - strand at 2538.186 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml remove 2,535,493 - CA264_10995 0.28 -0.1 2,535,554 + CA264_10995 0.33 +0.2 2,535,555 - CA264_10995 0.33 +0.9 2,535,584 + CA264_10995 0.35 -0.3 2,535,584 + CA264_10995 0.35 -0.4 2,535,585 - CA264_10995 0.36 +0.3 2,535,607 + CA264_10995 0.37 +0.2 2,535,608 - CA264_10995 0.37 -0.8 2,535,608 - CA264_10995 0.37 -0.2 2,535,608 - CA264_10995 0.37 -0.1 2,535,613 + CA264_10995 0.38 +0.3 2,535,613 + CA264_10995 0.38 +0.4 2,535,614 - CA264_10995 0.38 -1.3 2,535,614 - CA264_10995 0.38 +0.9 2,535,616 - CA264_10995 0.38 -1.8 2,535,631 + CA264_10995 0.39 -0.8 2,535,631 + CA264_10995 0.39 -1.8 2,535,889 + CA264_10995 0.61 -0.0 2,535,982 - CA264_10995 0.68 -0.0 2,536,031 - CA264_10995 0.72 +0.2 2,536,152 - CA264_10995 0.82 +0.3 2,536,210 - CA264_10995 0.87 -0.4 2,536,210 - CA264_10995 0.87 +0.3 2,536,311 - +0.0 2,536,318 + -0.5 2,536,321 - -0.0 2,536,340 - -0.4 2,536,359 + +0.3 2,536,363 + -0.0 2,536,363 + +0.2 2,536,363 + -0.2 2,536,363 + +0.3 2,536,367 + +0.4 2,536,367 + +0.2 2,536,367 + +0.3 2,536,368 - +0.9 2,536,368 - +0.5 2,536,368 - -0.4 2,537,294 - +0.9 2,537,294 - -1.4 2,537,303 - +0.4 2,537,787 - +0.7 2,537,787 - -0.2 2,537,789 + -0.7 2,537,790 - -0.8 2,537,855 + -0.0 2,537,855 + +0.2 2,537,867 + +0.7 2,537,874 + +0.2 2,537,875 - +0.1 2,537,963 + +0.6 2,537,964 - +0.3 2,537,990 + +0.9 2,537,990 + +1.1 2,537,990 + +0.4 2,537,990 + +0.2 2,538,015 - +0.5 2,538,015 - -0.3 2,538,015 - +0.9 2,538,027 + +1.9 2,538,027 + -0.2 2,538,142 - +0.5 2,538,186 - -0.6
Or see this region's nucleotide sequence