Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08090

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
1,867,093	-				+1.0
1,867,093	-				+0.9
1,867,093	-				-1.2
1,867,093	-				+0.1
1,867,094	+				+0.0
1,867,095	-				+1.5
1,867,097	+				+0.1
1,867,098	-				-0.4
1,867,106	+				+1.9
1,867,107	-				-0.2
1,867,120	+				+0.3
1,867,121	-				-0.9
1,867,187	-				-0.2
1,867,190	+				-1.7
1,867,191	-				-0.4
1,867,233	+				+1.9
1,867,333	+		CA264_08085	0.20	-1.1
1,867,334	-		CA264_08085	0.21	+0.1
1,867,381	+		CA264_08085	0.27	+1.7
1,867,495	-		CA264_08085	0.43	-0.4
1,867,512	+		CA264_08085	0.46	+0.3
1,867,658	-		CA264_08085	0.67	-0.4
1,867,851	+				-0.5
1,867,854	+				-0.5
1,867,952	+				+0.1
1,867,986	+				+0.2
1,867,987	-				-0.6
1,867,987	-				-0.1
1,867,995	+				-1.5
1,868,046	-				-0.1
1,868,071	+				-0.6
1,868,078	-				+1.7
1,868,078	-				-0.6
1,868,085	-				+0.4
1,868,085	-				-0.0
1,868,249	-		CA264_08090	0.23	-0.6
1,868,249	-		CA264_08090	0.23	+0.5
1,868,333	+		CA264_08090	0.35	-1.2
1,868,347	-		CA264_08090	0.37	+1.3
1,868,349	+		CA264_08090	0.38	+0.5
1,868,349	+		CA264_08090	0.38	+0.1
1,868,351	+		CA264_08090	0.38	-0.5
1,868,351	+		CA264_08090	0.38	-0.7
1,868,352	-		CA264_08090	0.38	-0.8
1,868,352	-		CA264_08090	0.38	+0.2
1,868,362	-		CA264_08090	0.39	+0.4
1,868,362	-		CA264_08090	0.39	-0.8
1,868,383	-		CA264_08090	0.42	+0.8
1,868,388	+		CA264_08090	0.43	-1.3
1,868,437	-		CA264_08090	0.50	+0.1
1,868,438	+		CA264_08090	0.50	-0.5
1,868,438	+		CA264_08090	0.50	-1.5
1,868,438	+		CA264_08090	0.50	-1.0
1,868,439	-		CA264_08090	0.50	-0.9
1,868,439	-		CA264_08090	0.50	+0.6
1,868,442	-		CA264_08090	0.51	-0.8
1,868,546	-		CA264_08090	0.65	+0.1
1,868,570	+		CA264_08090	0.69	-0.8
1,868,570	+		CA264_08090	0.69	+0.4
1,868,570	+		CA264_08090	0.69	+0.4
1,868,570	+		CA264_08090	0.69	+1.4
1,868,570	+		CA264_08090	0.69	-2.0
1,868,571	-		CA264_08090	0.69	-0.4
1,868,643	-		CA264_08090	0.79	-0.9
1,868,643	-		CA264_08090	0.79	-0.2
1,868,643	-		CA264_08090	0.79	-1.4
1,868,703	+		CA264_08090	0.88	-0.2
1,868,706	+		CA264_08090	0.88	+1.2
1,868,706	+		CA264_08090	0.88	-0.0
1,868,706	+		CA264_08090	0.88	-0.5
1,868,707	-		CA264_08090	0.88	-0.2
1,868,735	-				+0.8
1,868,781	-				+0.4
1,868,781	-				-1.3
1,868,791	-				-0.7
1,868,791	-				+0.5
1,868,791	-				+0.2
1,868,806	-				+0.9
1,868,829	-				-1.7
1,868,829	-				-1.1
1,868,829	-				+0.4
1,868,832	-				-0.9
1,868,832	-				-0.9
1,868,837	+				+1.2
1,868,837	+				+0.1
1,868,841	+				+0.9
1,868,870	-				+0.0
1,868,903	-				+0.1
1,868,903	-				+0.5
1,868,903	-				-0.7
1,868,903	-				+0.1
1,868,973	+				-2.7
1,869,028	+		CA264_08095	0.17	-0.6
1,869,039	+		CA264_08095	0.18	-0.6
1,869,040	-		CA264_08095	0.18	-1.1
1,869,042	+		CA264_08095	0.19	-1.9
1,869,047	-		CA264_08095	0.19	-0.1
1,869,065	-		CA264_08095	0.22	-1.5
1,869,072	+		CA264_08095	0.23	-1.4
1,869,083	+		CA264_08095	0.24	-2.2
1,869,083	+		CA264_08095	0.24	-0.7
1,869,083	+		CA264_08095	0.24	-0.2
1,869,084	-		CA264_08095	0.24	-2.0
1,869,093	+		CA264_08095	0.26	-0.8
1,869,148	-		CA264_08095	0.33	-0.6
1,869,181	-		CA264_08095	0.38	-1.4
1,869,205	+		CA264_08095	0.41	-1.1
1,869,271	+		CA264_08095	0.50	-1.8
1,869,272	-		CA264_08095	0.50	-0.8
1,869,284	+		CA264_08095	0.52	-0.5
1,869,284	+		CA264_08095	0.52	-1.5
1,869,285	-		CA264_08095	0.52	-0.7
1,869,354	+		CA264_08095	0.61	-0.2
1,869,354	+		CA264_08095	0.61	-1.7
1,869,354	+		CA264_08095	0.61	-2.0
1,869,359	-		CA264_08095	0.62	-0.7
1,869,413	+		CA264_08095	0.70	-0.2
1,869,440	-		CA264_08095	0.73	-2.7
1,869,446	+		CA264_08095	0.74	-3.1
1,869,446	+		CA264_08095	0.74	-1.7
1,869,446	+		CA264_08095	0.74	-1.5
1,869,447	-		CA264_08095	0.74	-0.4
1,869,447	-		CA264_08095	0.74	-2.7
1,869,522	-		CA264_08095	0.84	-0.9
1,869,522	-		CA264_08095	0.84	-1.9
1,869,522	-		CA264_08095	0.84	+0.8
1,869,549	+		CA264_08095	0.88	-0.5
1,869,549	+		CA264_08095	0.88	+1.2
1,869,549	+		CA264_08095	0.88	-2.6
1,869,588	+				-1.8
1,869,589	-				-1.4
1,869,589	-				-0.5
1,869,611	-				-3.0
1,869,712	-				-1.2
1,869,721	-				-1.2
1,869,721	-				-1.7
1,869,721	-				-0.8
1,869,751	-				-0.4