Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06340

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
1,471,710	+		CA264_06325	0.54	-2.5
1,471,711	-		CA264_06325	0.54	+0.5
1,471,711	-		CA264_06325	0.54	-0.8
1,471,766	-		CA264_06325	0.65	-0.7
1,471,784	+		CA264_06325	0.68	-0.8
1,471,784	+		CA264_06325	0.68	-1.7
1,471,811	+		CA264_06325	0.74	-1.9
1,471,812	-		CA264_06325	0.74	-0.1
1,471,814	-		CA264_06325	0.74	-0.4
1,471,819	+		CA264_06325	0.76	-1.1
1,471,819	+		CA264_06325	0.76	-0.8
1,471,819	+		CA264_06325	0.76	-2.5
1,471,819	+		CA264_06325	0.76	+0.4
1,471,843	-		CA264_06325	0.80	-0.2
1,471,856	-		CA264_06325	0.83	-2.8
1,471,856	-		CA264_06325	0.83	-0.4
1,471,970	-		CA264_06330	0.12	+0.3
1,471,980	+		CA264_06330	0.16	-0.7
1,472,086	-		CA264_06330	0.55	-1.2
1,472,181	-				-1.4
1,472,183	+				-0.8
1,472,188	+				-1.0
1,472,189	-				-0.5
1,472,189	-				-0.9
1,472,189	-				-0.3
1,472,197	+				-1.1
1,472,224	-				+0.6
1,472,224	-				-0.6
1,472,226	-				-0.9
1,472,330	-		CA264_06335	0.27	-1.0
1,472,582	+		CA264_06335	0.83	+0.2
1,472,600	-		CA264_06335	0.87	-0.6
1,472,629	+				-1.7
1,472,630	-				-0.4
1,472,677	-				-1.4
1,472,719	-		CA264_06340	0.12	-1.0
1,472,799	-		CA264_06340	0.22	-1.4
1,472,799	-		CA264_06340	0.22	-0.8
1,472,807	-		CA264_06340	0.23	-1.0
1,472,807	-		CA264_06340	0.23	+0.6
1,472,807	-		CA264_06340	0.23	+0.9
1,472,815	-		CA264_06340	0.24	-0.3
1,472,838	+		CA264_06340	0.26	-1.2
1,473,105	-		CA264_06340	0.59	-0.5
1,473,137	-		CA264_06340	0.63	-1.5
1,473,282	+		CA264_06340	0.80	-1.7
1,473,295	+		CA264_06340	0.82	-0.9
1,473,307	+		CA264_06340	0.83	-0.9
1,473,375	-				+0.8
1,473,466	-				-1.0
1,473,472	+				-0.8
1,473,473	-				-1.5
1,473,473	-				-1.4
1,473,501	+				-2.2
1,473,503	+				-2.7
1,473,503	+				-1.3
1,473,504	-				-1.6
1,473,511	-				-0.8
1,473,524	-				-0.5
1,473,524	-				-0.6
1,473,524	-				-1.8
1,473,622	+				+1.0
1,473,623	-				-0.4
1,473,643	+				+0.2
1,473,663	-				+1.7
1,473,674	-				+3.1
1,473,789	+				+2.3
1,473,789	+				+2.7
1,473,789	+				+2.5
1,473,789	+				+1.8
1,473,790	-				+0.9
1,473,794	+				+2.2
1,473,990	-		CA264_06345	0.19	+2.3
1,473,990	-		CA264_06345	0.19	+2.2
1,474,089	-		CA264_06345	0.24	+2.1
1,474,312	+		CA264_06345	0.37	+0.2
1,474,313	-		CA264_06345	0.37	+2.2
1,474,358	+		CA264_06345	0.40	+2.2
1,474,358	+		CA264_06345	0.40	+2.1
1,474,358	+		CA264_06345	0.40	+2.3
1,474,359	-		CA264_06345	0.40	+2.2
1,474,359	-		CA264_06345	0.40	+2.3
1,474,359	-		CA264_06345	0.40	+2.5
1,474,397	+		CA264_06345	0.42	+3.1
1,474,397	+		CA264_06345	0.42	+1.6
1,474,397	+		CA264_06345	0.42	+2.6
1,474,398	-		CA264_06345	0.42	+3.2
1,474,398	-		CA264_06345	0.42	+2.0
1,474,398	-		CA264_06345	0.42	+2.2
1,474,400	+		CA264_06345	0.42	+2.5
1,474,400	+		CA264_06345	0.42	+2.7
1,474,400	+		CA264_06345	0.42	+1.8
1,474,401	-		CA264_06345	0.42	+2.8
1,474,401	-		CA264_06345	0.42	+2.0
1,474,401	-		CA264_06345	0.42	+2.8
1,474,401	-		CA264_06345	0.42	+1.0
1,474,402	+		CA264_06345	0.42	+2.4