Experiment: m.b. Doxycycline hyclate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05200 and CA264_05205 are separated by 119 nucleotides CA264_05205 and CA264_05210 are separated by 58 nucleotides CA264_05210 and CA264_05215 are separated by 58 nucleotides CA264_05215 and CA264_05220 are separated by 223 nucleotides
CA264_05200: CA264_05200 - GDP-mannose 4,6-dehydratase, at 1,207,408 to 1,208,520
_05200
CA264_05205: CA264_05205 - tRNA-Asp, at 1,208,640 to 1,208,713
_05205
CA264_05210: CA264_05210 - tRNA-Asp, at 1,208,772 to 1,208,845
_05210
CA264_05215: CA264_05215 - tRNA-Asp, at 1,208,904 to 1,208,977
_05215
CA264_05220: CA264_05220 - acetyl-CoA carboxylase carboxyl transferase subunit alpha, at 1,209,201 to 1,210,151
_05220
Position (kb)
1208
1209 Strain fitness (log2 ratio)
-1
0
1 at 1207.686 kb on - strand, within CA264_05200 at 1207.763 kb on + strand, within CA264_05200 at 1207.763 kb on + strand, within CA264_05200 at 1207.789 kb on + strand, within CA264_05200 at 1207.892 kb on - strand, within CA264_05200 at 1207.905 kb on + strand, within CA264_05200 at 1207.912 kb on - strand, within CA264_05200 at 1207.912 kb on - strand, within CA264_05200 at 1207.912 kb on - strand, within CA264_05200 at 1207.936 kb on + strand, within CA264_05200 at 1207.936 kb on + strand, within CA264_05200 at 1207.936 kb on + strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.937 kb on - strand, within CA264_05200 at 1207.951 kb on - strand, within CA264_05200 at 1207.951 kb on - strand, within CA264_05200 at 1207.956 kb on - strand, within CA264_05200 at 1207.960 kb on - strand, within CA264_05200 at 1208.058 kb on - strand, within CA264_05200 at 1208.058 kb on - strand, within CA264_05200 at 1208.101 kb on + strand, within CA264_05200 at 1208.102 kb on - strand, within CA264_05200 at 1208.102 kb on - strand, within CA264_05200 at 1208.102 kb on - strand, within CA264_05200 at 1208.105 kb on + strand, within CA264_05200 at 1208.105 kb on + strand, within CA264_05200 at 1208.105 kb on + strand, within CA264_05200 at 1208.106 kb on - strand, within CA264_05200 at 1208.106 kb on - strand, within CA264_05200 at 1208.150 kb on - strand, within CA264_05200 at 1208.214 kb on - strand, within CA264_05200 at 1208.260 kb on + strand, within CA264_05200 at 1208.260 kb on + strand, within CA264_05200 at 1208.261 kb on - strand, within CA264_05200 at 1208.322 kb on - strand, within CA264_05200 at 1208.388 kb on + strand, within CA264_05200 at 1208.389 kb on - strand, within CA264_05200 at 1208.410 kb on + strand at 1208.477 kb on - strand at 1208.529 kb on + strand at 1208.534 kb on + strand at 1208.534 kb on + strand at 1208.535 kb on - strand at 1208.535 kb on - strand at 1208.535 kb on - strand at 1208.536 kb on + strand at 1208.536 kb on + strand at 1208.536 kb on + strand at 1208.537 kb on - strand at 1208.537 kb on - strand at 1208.540 kb on - strand at 1208.583 kb on - strand at 1208.583 kb on - strand at 1209.062 kb on + strand at 1209.071 kb on - strand at 1209.086 kb on - strand at 1209.089 kb on - strand at 1209.129 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml remove 1,207,686 - CA264_05200 0.25 -1.7 1,207,763 + CA264_05200 0.32 -1.2 1,207,763 + CA264_05200 0.32 -0.7 1,207,789 + CA264_05200 0.34 -1.4 1,207,892 - CA264_05200 0.43 -0.7 1,207,905 + CA264_05200 0.45 -0.2 1,207,912 - CA264_05200 0.45 -0.2 1,207,912 - CA264_05200 0.45 +1.1 1,207,912 - CA264_05200 0.45 -0.8 1,207,936 + CA264_05200 0.47 -0.1 1,207,936 + CA264_05200 0.47 +1.0 1,207,936 + CA264_05200 0.47 -0.4 1,207,937 - CA264_05200 0.48 +0.2 1,207,937 - CA264_05200 0.48 -0.4 1,207,937 - CA264_05200 0.48 -0.6 1,207,937 - CA264_05200 0.48 +0.3 1,207,937 - CA264_05200 0.48 -0.6 1,207,951 - CA264_05200 0.49 +0.2 1,207,951 - CA264_05200 0.49 -0.7 1,207,956 - CA264_05200 0.49 -0.2 1,207,960 - CA264_05200 0.50 -1.7 1,208,058 - CA264_05200 0.58 -1.0 1,208,058 - CA264_05200 0.58 -1.0 1,208,101 + CA264_05200 0.62 -1.1 1,208,102 - CA264_05200 0.62 +0.1 1,208,102 - CA264_05200 0.62 -0.1 1,208,102 - CA264_05200 0.62 -0.4 1,208,105 + CA264_05200 0.63 +0.2 1,208,105 + CA264_05200 0.63 +0.1 1,208,105 + CA264_05200 0.63 -0.1 1,208,106 - CA264_05200 0.63 -1.1 1,208,106 - CA264_05200 0.63 +0.1 1,208,150 - CA264_05200 0.67 +0.3 1,208,214 - CA264_05200 0.72 -0.5 1,208,260 + CA264_05200 0.77 -0.8 1,208,260 + CA264_05200 0.77 -0.4 1,208,261 - CA264_05200 0.77 -0.5 1,208,322 - CA264_05200 0.82 -1.0 1,208,388 + CA264_05200 0.88 +0.1 1,208,389 - CA264_05200 0.88 +0.1 1,208,410 + -0.9 1,208,477 - -0.6 1,208,529 + -0.1 1,208,534 + +0.3 1,208,534 + -0.0 1,208,535 - +0.3 1,208,535 - +0.2 1,208,535 - -0.1 1,208,536 + -0.2 1,208,536 + +0.9 1,208,536 + +0.7 1,208,537 - -0.6 1,208,537 - -1.3 1,208,540 - +0.4 1,208,583 - +0.2 1,208,583 - +0.6 1,209,062 + +0.3 1,209,071 - -0.9 1,209,086 - +0.1 1,209,089 - -1.2 1,209,129 + -0.3
Or see this region's nucleotide sequence