Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04340

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
1,002,699	+		CA264_04330	0.83	-0.9
1,002,731	-		CA264_04330	0.87	-3.6
1,002,843	-				-0.3
1,002,998	+		CA264_04335	0.16	-1.0
1,003,055	+		CA264_04335	0.29	+0.7
1,003,055	+		CA264_04335	0.29	+0.2
1,003,056	-		CA264_04335	0.29	+0.8
1,003,056	-		CA264_04335	0.29	+0.7
1,003,056	-		CA264_04335	0.29	+1.0
1,003,121	-		CA264_04335	0.44	+0.6
1,003,157	-		CA264_04335	0.52	-0.1
1,003,209	-		CA264_04335	0.64	+0.3
1,003,213	-		CA264_04335	0.64	-0.4
1,003,247	-		CA264_04335	0.72	+0.4
1,003,271	-		CA264_04335	0.77	+0.4
1,003,271	-		CA264_04335	0.77	+1.2
1,003,333	+				-0.5
1,003,360	+				-0.3
1,003,361	-				+0.3
1,003,472	+				+0.7
1,003,472	+				+0.8
1,003,473	-				+0.7
1,003,511	+				+1.8
1,003,512	-				-0.0
1,003,512	-				+0.4
1,003,526	+				+0.7
1,003,560	-				-0.1
1,003,565	-				+0.3
1,003,632	+				+0.6
1,003,694	+				+1.0
1,003,716	+		CA264_04340	0.11	+0.8
1,003,790	+		CA264_04340	0.15	+0.4
1,003,853	-		CA264_04340	0.18	+0.9
1,003,853	-		CA264_04340	0.18	+0.4
1,004,011	+		CA264_04340	0.27	+0.4
1,004,027	+		CA264_04340	0.28	+1.1
1,004,044	+		CA264_04340	0.28	+0.7
1,004,045	-		CA264_04340	0.29	+0.7
1,004,045	-		CA264_04340	0.29	+0.7
1,004,076	+		CA264_04340	0.30	-0.0
1,004,076	+		CA264_04340	0.30	+0.8
1,004,077	-		CA264_04340	0.30	+0.9
1,004,077	-		CA264_04340	0.30	+0.6
1,004,078	+		CA264_04340	0.30	+0.7
1,004,094	+		CA264_04340	0.31	+0.6
1,004,095	-		CA264_04340	0.31	+1.3
1,004,095	-		CA264_04340	0.31	+0.2
1,004,096	+		CA264_04340	0.31	+1.2
1,004,097	-		CA264_04340	0.31	+1.5
1,004,133	+		CA264_04340	0.33	+0.8
1,004,171	+		CA264_04340	0.35	+1.0
1,004,255	+		CA264_04340	0.40	+1.0
1,004,255	+		CA264_04340	0.40	+1.5
1,004,255	+		CA264_04340	0.40	+0.9
1,004,258	+		CA264_04340	0.40	+0.5
1,004,259	-		CA264_04340	0.40	+0.2
1,004,328	+		CA264_04340	0.44	+0.4
1,004,329	-		CA264_04340	0.44	+0.3
1,004,391	-		CA264_04340	0.47	+1.1
1,004,403	+		CA264_04340	0.48	-0.2
1,004,404	-		CA264_04340	0.48	+0.7
1,004,440	+		CA264_04340	0.50	+0.7
1,004,441	-		CA264_04340	0.50	+0.8
1,004,560	+		CA264_04340	0.56	+0.4
1,004,560	+		CA264_04340	0.56	+1.1
1,004,561	-		CA264_04340	0.56	+0.7
1,004,564	+		CA264_04340	0.56	+0.6
1,004,564	+		CA264_04340	0.56	+1.3
1,004,565	-		CA264_04340	0.56	-0.0
1,004,593	-		CA264_04340	0.58	+0.7
1,004,614	-		CA264_04340	0.59	+0.7
1,004,614	-		CA264_04340	0.59	+0.9
1,004,691	-		CA264_04340	0.63	+0.6
1,004,755	+		CA264_04340	0.66	+1.5
1,004,755	+		CA264_04340	0.66	+0.8
1,004,755	+		CA264_04340	0.66	+0.4
1,004,755	+		CA264_04340	0.66	+1.5
1,004,924	+		CA264_04340	0.75	+0.6
1,004,924	+		CA264_04340	0.75	+0.2
1,004,925	-		CA264_04340	0.75	+0.5
1,004,926	+		CA264_04340	0.76	+1.5
1,004,927	-		CA264_04340	0.76	+0.5
1,004,978	+		CA264_04340	0.78	+0.7
1,004,978	+		CA264_04340	0.78	+0.8
1,004,978	+		CA264_04340	0.78	+1.3
1,004,979	-		CA264_04340	0.78	-0.5
1,004,979	-		CA264_04340	0.78	+1.4
1,005,012	+		CA264_04340	0.80	+0.2
1,005,022	-		CA264_04340	0.81	+1.2
1,005,063	+		CA264_04340	0.83	+0.3
1,005,064	-		CA264_04340	0.83	+0.5
1,005,096	+		CA264_04340	0.85	-0.4
1,005,160	-		CA264_04340	0.88	+0.7
1,005,279	+				+1.3
1,005,280	-				+0.9
1,005,280	-				+0.1
1,005,294	+				+0.6
1,005,295	-				+0.6
1,005,327	-				+0.6
1,005,327	-				-0.4
1,005,327	-				+0.2
1,005,327	-				+0.4
1,005,338	-				-1.4
1,005,412	-				-0.6
1,005,437	-				+1.2
1,005,470	-				-0.2
1,005,485	-		CA264_04345	0.11	-1.3
1,005,487	+		CA264_04345	0.11	-1.5
1,005,488	-		CA264_04345	0.11	+0.4
1,005,504	+		CA264_04345	0.13	+1.5
1,005,543	-		CA264_04345	0.17	+0.4
1,005,607	+		CA264_04345	0.24	+1.4
1,005,629	+		CA264_04345	0.26	+1.3
1,005,629	+		CA264_04345	0.26	-0.1
1,005,640	+		CA264_04345	0.27	+0.6
1,005,674	-		CA264_04345	0.31	+0.3
1,005,674	-		CA264_04345	0.31	+0.4
1,005,678	+		CA264_04345	0.31	+1.0
1,005,678	+		CA264_04345	0.31	+1.3
1,005,678	+		CA264_04345	0.31	+1.1
1,005,679	-		CA264_04345	0.32	+0.5
1,005,679	-		CA264_04345	0.32	+0.4
1,005,685	+		CA264_04345	0.32	+0.8
1,005,686	-		CA264_04345	0.32	+0.1
1,005,736	+		CA264_04345	0.38	+0.7
1,005,736	+		CA264_04345	0.38	+1.1
1,005,737	-		CA264_04345	0.38	+0.7
1,005,750	-		CA264_04345	0.39	+0.3
1,005,817	+		CA264_04345	0.46	+1.6
1,005,832	-		CA264_04345	0.48	+0.3
1,005,845	+		CA264_04345	0.49	+1.2
1,005,845	+		CA264_04345	0.49	+0.9
1,005,894	+		CA264_04345	0.54	+0.8
1,006,004	-		CA264_04345	0.66	+0.5
1,006,026	+		CA264_04345	0.69	+2.0
1,006,027	-		CA264_04345	0.69	+0.9
1,006,042	-		CA264_04345	0.70	+0.4
1,006,042	-		CA264_04345	0.70	-0.2
1,006,047	+		CA264_04345	0.71	+2.2
1,006,048	-		CA264_04345	0.71	-0.9
1,006,103	-		CA264_04345	0.77	+0.2
1,006,124	-		CA264_04345	0.79	+0.9
1,006,135	+		CA264_04345	0.80	+1.8
1,006,135	+		CA264_04345	0.80	+1.2
1,006,136	-		CA264_04345	0.80	-0.4
1,006,207	+		CA264_04345	0.88	+1.1
1,006,219	-		CA264_04345	0.89	+1.5
1,006,219	-		CA264_04345	0.89	+1.4
1,006,288	+				+1.4
1,006,288	+				+1.2
1,006,289	-				+0.4
1,006,301	-				+0.7