Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_02155

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_02145 and CA264_02150 overlap by 2 nucleotidesCA264_02150 and CA264_02155 are separated by 44 nucleotidesCA264_02155 and CA264_02160 are separated by 319 nucleotides CA264_02145: CA264_02145 - beta-ketoacyl-ACP reductase, at 495,015 to 495,761 _02145 CA264_02150: CA264_02150 - hypothetical protein, at 495,760 to 495,996 _02150 CA264_02155: CA264_02155 - peptidase M23, at 496,041 to 497,378 _02155 CA264_02160: CA264_02160 - hypothetical protein, at 497,698 to 498,264 _02160 Position (kb) 496 497 498Strain fitness (log2 ratio) -2 -1 0 1 2 3at 495.750 kb on + strandat 495.862 kb on + strand, within CA264_02150at 495.862 kb on + strand, within CA264_02150at 495.862 kb on + strand, within CA264_02150at 495.863 kb on - strand, within CA264_02150at 495.911 kb on + strand, within CA264_02150at 495.912 kb on - strand, within CA264_02150at 495.915 kb on - strand, within CA264_02150at 495.918 kb on + strand, within CA264_02150at 495.919 kb on - strand, within CA264_02150at 495.919 kb on - strand, within CA264_02150at 495.935 kb on + strand, within CA264_02150at 495.936 kb on - strand, within CA264_02150at 495.936 kb on - strand, within CA264_02150at 495.945 kb on + strand, within CA264_02150at 496.002 kb on - strandat 496.035 kb on - strandat 496.203 kb on + strand, within CA264_02155at 496.204 kb on - strand, within CA264_02155at 496.361 kb on + strand, within CA264_02155at 496.392 kb on + strand, within CA264_02155at 496.435 kb on - strand, within CA264_02155at 496.443 kb on + strand, within CA264_02155at 496.443 kb on + strand, within CA264_02155at 496.443 kb on + strand, within CA264_02155at 496.444 kb on - strand, within CA264_02155at 496.464 kb on + strand, within CA264_02155at 496.465 kb on - strand, within CA264_02155at 496.465 kb on - strand, within CA264_02155at 496.519 kb on + strand, within CA264_02155at 496.520 kb on - strand, within CA264_02155at 496.626 kb on + strand, within CA264_02155at 496.626 kb on + strand, within CA264_02155at 496.626 kb on + strand, within CA264_02155at 496.626 kb on + strand, within CA264_02155at 496.626 kb on + strand, within CA264_02155at 496.673 kb on + strand, within CA264_02155at 496.683 kb on + strand, within CA264_02155at 496.803 kb on + strand, within CA264_02155at 496.860 kb on + strand, within CA264_02155at 496.862 kb on + strand, within CA264_02155at 496.976 kb on - strand, within CA264_02155at 497.004 kb on + strand, within CA264_02155at 497.005 kb on - strand, within CA264_02155at 497.006 kb on + strand, within CA264_02155at 497.022 kb on + strand, within CA264_02155at 497.023 kb on - strand, within CA264_02155at 497.053 kb on - strand, within CA264_02155at 497.064 kb on + strand, within CA264_02155at 497.065 kb on - strand, within CA264_02155at 497.078 kb on + strand, within CA264_02155at 497.079 kb on - strand, within CA264_02155at 497.136 kb on + strand, within CA264_02155at 497.136 kb on + strand, within CA264_02155at 497.317 kb on + strandat 497.317 kb on + strandat 497.326 kb on + strandat 497.326 kb on + strandat 497.326 kb on + strandat 497.376 kb on + strandat 497.377 kb on - strandat 497.377 kb on - strandat 497.377 kb on - strandat 497.381 kb on + strandat 497.382 kb on - strandat 497.382 kb on - strandat 497.382 kb on - strandat 497.383 kb on + strandat 497.383 kb on + strandat 497.384 kb on - strandat 497.384 kb on - strandat 497.384 kb on - strandat 497.384 kb on - strandat 497.387 kb on - strandat 497.493 kb on - strandat 497.518 kb on + strandat 497.553 kb on + strandat 497.553 kb on + strandat 497.553 kb on + strandat 497.554 kb on - strandat 497.684 kb on + strandat 497.684 kb on + strandat 497.699 kb on + strandat 497.700 kb on - strandat 497.712 kb on + strandat 497.713 kb on - strandat 497.721 kb on - strandat 497.796 kb on + strand, within CA264_02160at 497.796 kb on + strand, within CA264_02160at 497.819 kb on + strand, within CA264_02160at 497.822 kb on + strand, within CA264_02160at 497.863 kb on - strand, within CA264_02160at 497.863 kb on - strand, within CA264_02160at 497.863 kb on - strand, within CA264_02160at 497.863 kb on - strand, within CA264_02160at 497.865 kb on - strand, within CA264_02160at 497.886 kb on - strand, within CA264_02160at 497.925 kb on - strand, within CA264_02160at 497.965 kb on - strand, within CA264_02160at 497.988 kb on - strand, within CA264_02160at 497.988 kb on - strand, within CA264_02160at 498.002 kb on + strand, within CA264_02160at 498.003 kb on - strand, within CA264_02160at 498.026 kb on + strand, within CA264_02160at 498.027 kb on - strand, within CA264_02160at 498.027 kb on - strand, within CA264_02160at 498.027 kb on - strand, within CA264_02160at 498.170 kb on + strand, within CA264_02160at 498.307 kb on - strandat 498.307 kb on - strandat 498.316 kb on + strandat 498.317 kb on - strandat 498.322 kb on + strandat 498.322 kb on + strandat 498.340 kb on + strandat 498.341 kb on - strandat 498.361 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml
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495,750 + -0.2
495,862 + CA264_02150 0.43 -1.4
495,862 + CA264_02150 0.43 +0.2
495,862 + CA264_02150 0.43 +0.2
495,863 - CA264_02150 0.43 -0.0
495,911 + CA264_02150 0.64 -0.3
495,912 - CA264_02150 0.64 +0.7
495,915 - CA264_02150 0.65 +0.6
495,918 + CA264_02150 0.67 +1.5
495,919 - CA264_02150 0.67 +0.4
495,919 - CA264_02150 0.67 -0.4
495,935 + CA264_02150 0.74 +0.1
495,936 - CA264_02150 0.74 +0.2
495,936 - CA264_02150 0.74 -0.6
495,945 + CA264_02150 0.78 +0.2
496,002 - +1.0
496,035 - +0.2
496,203 + CA264_02155 0.12 -0.3
496,204 - CA264_02155 0.12 +0.9
496,361 + CA264_02155 0.24 +0.1
496,392 + CA264_02155 0.26 +0.2
496,435 - CA264_02155 0.29 +0.6
496,443 + CA264_02155 0.30 -0.5
496,443 + CA264_02155 0.30 -1.8
496,443 + CA264_02155 0.30 +1.0
496,444 - CA264_02155 0.30 +0.1
496,464 + CA264_02155 0.32 -0.6
496,465 - CA264_02155 0.32 -1.3
496,465 - CA264_02155 0.32 +0.7
496,519 + CA264_02155 0.36 +0.4
496,520 - CA264_02155 0.36 +1.1
496,626 + CA264_02155 0.44 -0.1
496,626 + CA264_02155 0.44 -0.1
496,626 + CA264_02155 0.44 +0.7
496,626 + CA264_02155 0.44 +1.0
496,626 + CA264_02155 0.44 +1.1
496,673 + CA264_02155 0.47 -0.0
496,683 + CA264_02155 0.48 -0.6
496,803 + CA264_02155 0.57 -0.0
496,860 + CA264_02155 0.61 -0.5
496,862 + CA264_02155 0.61 +0.1
496,976 - CA264_02155 0.70 +0.9
497,004 + CA264_02155 0.72 -1.1
497,005 - CA264_02155 0.72 +0.2
497,006 + CA264_02155 0.72 +0.7
497,022 + CA264_02155 0.73 -0.5
497,023 - CA264_02155 0.73 +0.2
497,053 - CA264_02155 0.76 +0.8
497,064 + CA264_02155 0.76 -1.3
497,065 - CA264_02155 0.77 -0.5
497,078 + CA264_02155 0.78 -0.2
497,079 - CA264_02155 0.78 +0.6
497,136 + CA264_02155 0.82 +0.8
497,136 + CA264_02155 0.82 -0.2
497,317 + -0.1
497,317 + -0.8
497,326 + +1.3
497,326 + -0.6
497,326 + -0.9
497,376 + -0.3
497,377 - +2.2
497,377 - -0.2
497,377 - +0.5
497,381 + +2.5
497,382 - +0.6
497,382 - -0.3
497,382 - -0.2
497,383 + -0.3
497,383 + -0.5
497,384 - -0.6
497,384 - -0.1
497,384 - -0.1
497,384 - -0.8
497,387 - -0.3
497,493 - +1.1
497,518 + +0.8
497,553 + +3.0
497,553 + +1.0
497,553 + -0.0
497,554 - -0.3
497,684 + -0.4
497,684 + -0.5
497,699 + -1.7
497,700 - -0.5
497,712 + +2.0
497,713 - -0.3
497,721 - -0.4
497,796 + CA264_02160 0.17 -0.2
497,796 + CA264_02160 0.17 +0.3
497,819 + CA264_02160 0.21 +0.5
497,822 + CA264_02160 0.22 -0.7
497,863 - CA264_02160 0.29 -0.1
497,863 - CA264_02160 0.29 -0.0
497,863 - CA264_02160 0.29 +1.2
497,863 - CA264_02160 0.29 -0.1
497,865 - CA264_02160 0.29 +1.4
497,886 - CA264_02160 0.33 +0.1
497,925 - CA264_02160 0.40 +0.1
497,965 - CA264_02160 0.47 +0.5
497,988 - CA264_02160 0.51 +0.3
497,988 - CA264_02160 0.51 +0.5
498,002 + CA264_02160 0.54 -0.5
498,003 - CA264_02160 0.54 -0.2
498,026 + CA264_02160 0.58 +1.3
498,027 - CA264_02160 0.58 -1.7
498,027 - CA264_02160 0.58 -0.0
498,027 - CA264_02160 0.58 -0.4
498,170 + CA264_02160 0.83 -0.7
498,307 - +0.6
498,307 - -1.1
498,316 + -0.5
498,317 - -0.3
498,322 + -0.6
498,322 + -0.6
498,340 + -0.7
498,341 - -0.1
498,361 + -0.7

Or see this region's nucleotide sequence