Experiment: m.b. Doxycycline hyclate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01145 and CA264_01150 are separated by 43 nucleotides CA264_01150 and CA264_01155 are separated by 275 nucleotides
CA264_01145: CA264_01145 - dienelactone hydrolase, at 252,394 to 253,266
_01145
CA264_01150: CA264_01150 - Maebl, at 253,310 to 254,116
_01150
CA264_01155: CA264_01155 - Zn-dependent protease, at 254,392 to 255,387
_01155
Position (kb) 253
254
255 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 252.350 kb on + strand at 252.351 kb on - strand at 252.395 kb on + strand at 252.461 kb on + strand at 252.462 kb on - strand at 252.462 kb on - strand at 252.503 kb on + strand, within CA264_01145 at 252.510 kb on + strand, within CA264_01145 at 252.605 kb on - strand, within CA264_01145 at 252.640 kb on - strand, within CA264_01145 at 252.659 kb on + strand, within CA264_01145 at 252.663 kb on - strand, within CA264_01145 at 252.770 kb on + strand, within CA264_01145 at 252.771 kb on - strand, within CA264_01145 at 252.857 kb on - strand, within CA264_01145 at 252.870 kb on - strand, within CA264_01145 at 252.901 kb on + strand, within CA264_01145 at 252.969 kb on + strand, within CA264_01145 at 252.970 kb on - strand, within CA264_01145 at 253.003 kb on - strand, within CA264_01145 at 253.047 kb on + strand, within CA264_01145 at 253.048 kb on - strand, within CA264_01145 at 253.250 kb on + strand at 253.384 kb on - strand at 253.384 kb on - strand at 253.454 kb on + strand, within CA264_01150 at 253.648 kb on + strand, within CA264_01150 at 253.681 kb on + strand, within CA264_01150 at 253.687 kb on + strand, within CA264_01150 at 253.697 kb on - strand, within CA264_01150 at 253.751 kb on + strand, within CA264_01150 at 253.751 kb on + strand, within CA264_01150 at 254.033 kb on + strand, within CA264_01150 at 254.033 kb on + strand, within CA264_01150 at 254.034 kb on - strand, within CA264_01150 at 254.034 kb on - strand, within CA264_01150 at 254.092 kb on + strand at 254.121 kb on - strand at 254.175 kb on + strand at 254.179 kb on + strand at 254.179 kb on + strand at 254.231 kb on + strand at 254.377 kb on + strand at 254.379 kb on + strand at 254.864 kb on + strand, within CA264_01155 at 255.063 kb on + strand, within CA264_01155 at 255.109 kb on + strand, within CA264_01155
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml remove 252,350 + +0.7 252,351 - -0.3 252,395 + +0.7 252,461 + +0.1 252,462 - +1.5 252,462 - +0.1 252,503 + CA264_01145 0.12 -0.6 252,510 + CA264_01145 0.13 +1.3 252,605 - CA264_01145 0.24 +0.8 252,640 - CA264_01145 0.28 +0.4 252,659 + CA264_01145 0.30 +0.3 252,663 - CA264_01145 0.31 -0.6 252,770 + CA264_01145 0.43 +1.9 252,771 - CA264_01145 0.43 +0.1 252,857 - CA264_01145 0.53 +0.3 252,870 - CA264_01145 0.55 +1.8 252,901 + CA264_01145 0.58 +0.1 252,969 + CA264_01145 0.66 +0.1 252,970 - CA264_01145 0.66 +0.4 253,003 - CA264_01145 0.70 -0.1 253,047 + CA264_01145 0.75 +0.1 253,048 - CA264_01145 0.75 -0.4 253,250 + +0.1 253,384 - +1.4 253,384 - -2.4 253,454 + CA264_01150 0.18 -0.1 253,648 + CA264_01150 0.42 +0.7 253,681 + CA264_01150 0.46 -0.0 253,687 + CA264_01150 0.47 +0.1 253,697 - CA264_01150 0.48 +1.3 253,751 + CA264_01150 0.55 +1.0 253,751 + CA264_01150 0.55 +0.2 254,033 + CA264_01150 0.90 -0.6 254,033 + CA264_01150 0.90 -0.6 254,034 - CA264_01150 0.90 +1.2 254,034 - CA264_01150 0.90 +0.7 254,092 + -0.1 254,121 - -1.0 254,175 + -4.3 254,179 + -3.0 254,179 + -1.1 254,231 + -3.2 254,377 + -5.5 254,379 + -3.4 254,864 + CA264_01155 0.47 -2.1 255,063 + CA264_01155 0.67 -0.6 255,109 + CA264_01155 0.72 -1.5
Or see this region's nucleotide sequence