Experiment: m.b. Doxycycline hyclate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00755 and CA264_00760 are separated by 234 nucleotides CA264_00760 and CA264_00765 are separated by 64 nucleotides CA264_00765 and CA264_00770 are separated by 101 nucleotides
CA264_00755: CA264_00755 - SAM-dependent methyltransferase, at 161,671 to 162,927
_00755
CA264_00760: CA264_00760 - NAD(+) synthase, at 163,162 to 165,048
_00760
CA264_00765: CA264_00765 - hypothetical protein, at 165,113 to 165,442
_00765
CA264_00770: CA264_00770 - prolipoprotein diacylglyceryl transferase, at 165,544 to 166,395
_00770
Position (kb) 163
164
165
166 Strain fitness (log2 ratio) -2
-1
0
1
2 at 162.285 kb on - strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.311 kb on - strand, within CA264_00755 at 162.311 kb on - strand, within CA264_00755 at 162.328 kb on + strand, within CA264_00755 at 162.329 kb on - strand, within CA264_00755 at 162.348 kb on + strand, within CA264_00755 at 162.390 kb on - strand, within CA264_00755 at 162.462 kb on - strand, within CA264_00755 at 162.462 kb on - strand, within CA264_00755 at 162.524 kb on - strand, within CA264_00755 at 162.524 kb on - strand, within CA264_00755 at 162.555 kb on + strand, within CA264_00755 at 162.555 kb on + strand, within CA264_00755 at 162.556 kb on - strand, within CA264_00755 at 162.558 kb on + strand, within CA264_00755 at 162.559 kb on - strand, within CA264_00755 at 162.562 kb on + strand, within CA264_00755 at 162.562 kb on + strand, within CA264_00755 at 162.725 kb on - strand, within CA264_00755 at 162.763 kb on - strand, within CA264_00755 at 162.787 kb on + strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.836 kb on + strand at 162.837 kb on - strand at 162.841 kb on + strand at 162.842 kb on - strand at 162.842 kb on - strand at 162.861 kb on + strand at 162.862 kb on - strand at 162.870 kb on - strand at 162.918 kb on + strand at 162.923 kb on + strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.926 kb on - strand at 162.926 kb on - strand at 162.929 kb on - strand at 162.944 kb on + strand at 162.944 kb on + strand at 162.948 kb on + strand at 162.972 kb on - strand at 162.976 kb on - strand at 163.078 kb on + strand at 163.078 kb on + strand at 163.078 kb on + strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.080 kb on + strand at 163.081 kb on - strand at 163.081 kb on - strand at 163.127 kb on + strand at 163.128 kb on - strand at 163.140 kb on + strand at 163.140 kb on + strand at 163.142 kb on + strand at 163.142 kb on + strand at 163.143 kb on - strand at 163.143 kb on - strand at 163.143 kb on - strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.145 kb on - strand at 163.145 kb on - strand at 163.153 kb on + strand at 163.153 kb on + strand at 163.154 kb on - strand at 163.154 kb on - strand at 165.028 kb on - strand at 165.046 kb on + strand at 165.046 kb on + strand at 165.046 kb on + strand at 165.046 kb on + strand at 165.047 kb on - strand at 165.047 kb on - strand at 165.047 kb on - strand at 165.047 kb on - strand at 165.047 kb on - strand at 165.065 kb on - strand at 165.069 kb on + strand at 165.203 kb on + strand, within CA264_00765 at 165.204 kb on - strand, within CA264_00765 at 165.204 kb on - strand, within CA264_00765 at 165.206 kb on - strand, within CA264_00765 at 165.288 kb on + strand, within CA264_00765 at 165.288 kb on + strand, within CA264_00765 at 165.289 kb on - strand, within CA264_00765 at 165.291 kb on + strand, within CA264_00765 at 165.333 kb on + strand, within CA264_00765 at 165.467 kb on + strand at 165.468 kb on - strand at 165.490 kb on + strand at 165.491 kb on - strand at 165.530 kb on + strand at 165.530 kb on + strand at 165.531 kb on - strand at 165.531 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml remove 162,285 - CA264_00755 0.49 -0.2 162,310 + CA264_00755 0.51 -0.6 162,310 + CA264_00755 0.51 -0.3 162,310 + CA264_00755 0.51 -1.5 162,311 - CA264_00755 0.51 -0.5 162,311 - CA264_00755 0.51 +1.4 162,328 + CA264_00755 0.52 +1.5 162,329 - CA264_00755 0.52 -0.4 162,348 + CA264_00755 0.54 -1.3 162,390 - CA264_00755 0.57 -0.0 162,462 - CA264_00755 0.63 -2.3 162,462 - CA264_00755 0.63 -0.8 162,524 - CA264_00755 0.68 -1.6 162,524 - CA264_00755 0.68 -0.8 162,555 + CA264_00755 0.70 +0.3 162,555 + CA264_00755 0.70 -0.6 162,556 - CA264_00755 0.70 -0.1 162,558 + CA264_00755 0.71 -0.5 162,559 - CA264_00755 0.71 -0.1 162,562 + CA264_00755 0.71 +0.3 162,562 + CA264_00755 0.71 -0.3 162,725 - CA264_00755 0.84 -0.4 162,763 - CA264_00755 0.87 +0.9 162,787 + CA264_00755 0.89 -1.6 162,788 - CA264_00755 0.89 -0.7 162,788 - CA264_00755 0.89 +0.4 162,788 - CA264_00755 0.89 -0.4 162,836 + -0.5 162,837 - +0.1 162,841 + -0.2 162,842 - -0.0 162,842 - -0.6 162,861 + -0.6 162,862 - -0.3 162,870 - -0.8 162,918 + +0.3 162,923 + -0.5 162,924 - -0.3 162,924 - +0.9 162,924 - -0.7 162,924 - -1.5 162,926 - +0.1 162,926 - -0.4 162,929 - -0.4 162,944 + -0.6 162,944 + -1.5 162,948 + +0.2 162,972 - +0.2 162,976 - -1.7 163,078 + -0.3 163,078 + -0.3 163,078 + -0.7 163,079 - +1.2 163,079 - +0.1 163,079 - +0.4 163,079 - -0.2 163,079 - +0.4 163,080 + -0.4 163,081 - +2.3 163,081 - -0.4 163,127 + +0.1 163,128 - -0.2 163,140 + +0.5 163,140 + -0.4 163,142 + +1.0 163,142 + -0.9 163,143 - -0.0 163,143 - +0.8 163,143 - -1.9 163,144 + -0.4 163,144 + -0.2 163,144 + -0.3 163,144 + -0.1 163,144 + -0.3 163,145 - -0.3 163,145 - -0.4 163,153 + -0.6 163,153 + +0.2 163,154 - -1.8 163,154 - -0.4 165,028 - +2.7 165,046 + +1.2 165,046 + +1.7 165,046 + +2.0 165,046 + +1.7 165,047 - +2.2 165,047 - +1.6 165,047 - +1.9 165,047 - +2.5 165,047 - +1.9 165,065 - +1.7 165,069 + +0.6 165,203 + CA264_00765 0.27 -0.5 165,204 - CA264_00765 0.28 -0.3 165,204 - CA264_00765 0.28 +1.2 165,206 - CA264_00765 0.28 +0.4 165,288 + CA264_00765 0.53 -0.6 165,288 + CA264_00765 0.53 +0.8 165,289 - CA264_00765 0.53 +0.9 165,291 + CA264_00765 0.54 -0.5 165,333 + CA264_00765 0.67 +0.2 165,467 + -0.6 165,468 - +1.1 165,490 + -0.5 165,491 - +1.8 165,530 + +0.3 165,530 + -0.0 165,531 - -0.3 165,531 - +0.1
Or see this region's nucleotide sequence