Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00490

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
106,346	+		CA264_00485	0.16	-1.3
106,346	+		CA264_00485	0.16	-0.9
106,347	-		CA264_00485	0.16	+0.3
106,347	-		CA264_00485	0.16	-0.5
106,348	+		CA264_00485	0.16	-1.0
106,348	+		CA264_00485	0.16	-0.1
106,348	+		CA264_00485	0.16	-0.2
106,349	-		CA264_00485	0.16	-0.5
106,349	-		CA264_00485	0.16	-0.5
106,353	+		CA264_00485	0.17	-0.3
106,353	+		CA264_00485	0.17	-0.8
106,354	-		CA264_00485	0.17	-2.0
106,354	-		CA264_00485	0.17	-1.1
106,354	-		CA264_00485	0.17	+0.1
106,354	-		CA264_00485	0.17	-0.2
106,404	+		CA264_00485	0.21	-0.8
106,405	-		CA264_00485	0.21	-1.2
106,449	+		CA264_00485	0.25	+1.1
106,460	+		CA264_00485	0.26	-0.2
106,502	+		CA264_00485	0.29	-1.5
106,503	-		CA264_00485	0.29	-0.7
106,607	-		CA264_00485	0.38	-0.2
106,697	-		CA264_00485	0.46	+0.1
106,701	-		CA264_00485	0.46	-0.2
106,742	+		CA264_00485	0.49	-1.6
106,788	+		CA264_00485	0.53	-0.4
106,788	+		CA264_00485	0.53	-1.8
106,788	+		CA264_00485	0.53	-0.4
106,868	+		CA264_00485	0.60	+1.6
106,869	-		CA264_00485	0.60	-1.0
106,869	-		CA264_00485	0.60	+0.0
106,869	-		CA264_00485	0.60	-0.5
106,881	-		CA264_00485	0.61	-0.1
106,886	+		CA264_00485	0.62	-0.4
106,887	-		CA264_00485	0.62	-0.2
106,919	+		CA264_00485	0.64	-1.4
106,919	+		CA264_00485	0.64	-1.7
106,920	-		CA264_00485	0.64	-0.1
106,920	-		CA264_00485	0.64	-1.1
106,922	-		CA264_00485	0.65	-1.2
106,936	+		CA264_00485	0.66	-0.3
106,954	-		CA264_00485	0.67	+1.3
106,954	-		CA264_00485	0.67	-0.2
106,957	-		CA264_00485	0.68	+0.3
106,957	-		CA264_00485	0.68	+0.5
106,957	-		CA264_00485	0.68	-1.3
107,026	-		CA264_00485	0.73	-0.8
107,047	-		CA264_00485	0.75	-0.6
107,050	-		CA264_00485	0.75	-0.2
107,070	+		CA264_00485	0.77	+0.3
107,071	-		CA264_00485	0.77	+0.2
107,073	+		CA264_00485	0.77	+0.1
107,074	-		CA264_00485	0.77	-0.3
107,074	-		CA264_00485	0.77	-0.3
107,076	-		CA264_00485	0.78	+1.7
107,076	-		CA264_00485	0.78	-0.8
107,209	-		CA264_00485	0.89	-0.7
107,250	-				-0.3
107,250	-				-0.1
107,341	+				-0.6
107,342	-				-1.5
107,346	+				-0.3
107,347	-				+0.0
107,400	+				-0.5
107,401	-				-0.6
107,403	+				-1.7
107,403	+				+0.3
107,424	+				-1.3
107,437	-				-0.3
107,457	+				-0.7
107,639	+		CA264_00490	0.12	+0.3
107,639	+		CA264_00490	0.12	-0.3
107,645	+		CA264_00490	0.13	+0.3
107,652	+		CA264_00490	0.13	-1.0
107,693	+		CA264_00490	0.15	-0.0
107,748	+		CA264_00490	0.17	-1.6
107,749	-		CA264_00490	0.17	-1.2
107,754	+		CA264_00490	0.17	-0.2
107,759	-		CA264_00490	0.17	-2.1
107,759	-		CA264_00490	0.17	-0.8
107,968	+		CA264_00490	0.26	-0.3
107,968	+		CA264_00490	0.26	-0.4
108,006	-		CA264_00490	0.28	-1.1
108,022	+		CA264_00490	0.28	-0.1
108,022	+		CA264_00490	0.28	-0.2
108,124	-		CA264_00490	0.33	-0.6
108,207	+		CA264_00490	0.36	-0.7
108,220	-		CA264_00490	0.37	-0.4
108,220	-		CA264_00490	0.37	-0.1
108,235	+		CA264_00490	0.37	-0.4
108,240	-		CA264_00490	0.37	-1.4
108,240	-		CA264_00490	0.37	-0.9
108,244	+		CA264_00490	0.38	-0.4
108,314	+		CA264_00490	0.40	+0.1
108,314	+		CA264_00490	0.40	-1.1
108,320	-		CA264_00490	0.41	-0.3
108,348	+		CA264_00490	0.42	-0.9
108,369	+		CA264_00490	0.43	+0.8
108,419	-		CA264_00490	0.45	-0.4
108,518	+		CA264_00490	0.49	-0.2
108,717	+		CA264_00490	0.57	-0.3
108,793	+		CA264_00490	0.60	-0.9
108,820	-		CA264_00490	0.62	-0.2
108,837	+		CA264_00490	0.62	-0.7
108,838	-		CA264_00490	0.62	-0.2
108,946	-		CA264_00490	0.67	+0.3
109,011	+		CA264_00490	0.70	+0.5
109,043	-		CA264_00490	0.71	-1.5
109,179	+		CA264_00490	0.77	-0.7
109,179	+		CA264_00490	0.77	-0.5
109,179	+		CA264_00490	0.77	-0.3
109,180	-		CA264_00490	0.77	-0.4
109,236	-		CA264_00490	0.79	+0.7
109,238	+		CA264_00490	0.79	-1.2
109,238	+		CA264_00490	0.79	-1.3
109,244	-		CA264_00490	0.79	-0.4
109,266	-		CA264_00490	0.80	-0.2
109,286	+		CA264_00490	0.81	-0.3
109,286	+		CA264_00490	0.81	-1.1
109,286	+		CA264_00490	0.81	-1.9
109,286	+		CA264_00490	0.81	-0.3
109,286	+		CA264_00490	0.81	-0.2
109,287	-		CA264_00490	0.81	-2.5
109,287	-		CA264_00490	0.81	+0.1
109,353	+		CA264_00490	0.84	-0.3
109,441	+		CA264_00490	0.88	+0.8
109,442	-		CA264_00490	0.88	+0.3
109,446	-		CA264_00490	0.88	-0.3
109,446	-		CA264_00490	0.88	+0.4
109,499	-				-1.0
109,500	+				+0.8
109,500	+				-0.2
109,505	-				+0.3
109,575	-				-0.9
109,673	+				-0.9
109,673	+				+1.2
109,718	+				-0.1
109,718	+				-1.0
109,721	+				+0.3
109,721	+				+0.2
109,722	-				+1.4
109,724	-				+1.3
109,738	+				+0.5
109,739	-				-0.7
109,747	+				+1.4
109,748	-				+1.1
109,748	-				+1.5
109,750	+				-0.4
109,819	+				-0.5
109,819	+				+0.1
109,859	+				+0.0
109,859	+				-0.9
109,862	+				-0.2
109,862	+				-0.3
109,862	+				-0.4
109,863	-				-0.2
109,867	-				-1.8
109,867	-				-0.6
109,867	-				-0.5
109,869	-				-1.0
109,880	+				-0.2
109,881	-				+1.8
109,886	+				-0.6
109,910	-				-0.7
109,953	+				-0.4
109,953	+				-0.6
109,953	+				-1.3
110,010	+				-0.4
110,010	+				-0.2
110,011	-				-1.1
110,022	+				-0.2
110,023	-				-2.5
110,237	+		CA264_00495	0.18	-0.3
110,238	-		CA264_00495	0.18	-0.7
110,298	-		CA264_00495	0.23	-0.5
110,300	+		CA264_00495	0.23	+0.2
110,301	-		CA264_00495	0.23	-0.7
110,336	-		CA264_00495	0.26	-0.5
110,336	-		CA264_00495	0.26	-0.7
110,369	+		CA264_00495	0.29	-0.0
110,369	+		CA264_00495	0.29	+0.1
110,370	-		CA264_00495	0.29	-0.6
110,370	-		CA264_00495	0.29	+1.1
110,373	+		CA264_00495	0.29	+1.1
110,373	+		CA264_00495	0.29	+2.7
110,373	+		CA264_00495	0.29	-0.5
110,374	-		CA264_00495	0.29	+0.2
110,485	+		CA264_00495	0.38	-0.0
110,491	-		CA264_00495	0.39	+0.5
110,519	-		CA264_00495	0.41	-0.6
110,529	+		CA264_00495	0.42	-0.4
110,573	+		CA264_00495	0.46	-0.3
110,573	+		CA264_00495	0.46	+0.1
110,593	-		CA264_00495	0.47	-0.7
110,647	+		CA264_00495	0.52	+0.2
110,648	-		CA264_00495	0.52	-0.1
110,649	+		CA264_00495	0.52	-0.1
110,732	+		CA264_00495	0.59	+0.3