Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01165 and PS417_01170 are separated by 357 nucleotides PS417_01170 and PS417_01175 are separated by 117 nucleotides
PS417_01165: PS417_01165 - transcription accessory protein, at 255,712 to 258,036
_01165
PS417_01170: PS417_01170 - chemotaxis protein CheY, at 258,394 to 259,134
_01170
PS417_01175: PS417_01175 - ATPase, at 259,252 to 260,565
_01175
Position (kb) 258
259
260 Strain fitness (log2 ratio) -2
-1
0
1 at 257.495 kb on + strand, within PS417_01165 at 257.495 kb on + strand, within PS417_01165 at 257.500 kb on - strand, within PS417_01165 at 257.552 kb on + strand, within PS417_01165 at 257.552 kb on + strand, within PS417_01165 at 257.552 kb on + strand, within PS417_01165 at 257.553 kb on - strand, within PS417_01165 at 257.553 kb on - strand, within PS417_01165 at 257.724 kb on - strand, within PS417_01165 at 257.724 kb on - strand, within PS417_01165 at 257.919 kb on + strand at 257.920 kb on - strand at 258.144 kb on + strand at 258.145 kb on - strand at 258.244 kb on + strand at 258.247 kb on - strand at 258.345 kb on + strand at 258.345 kb on + strand at 258.379 kb on + strand at 259.236 kb on + strand at 259.237 kb on - strand at 259.237 kb on - strand at 259.237 kb on - strand at 259.240 kb on + strand at 259.240 kb on + strand at 259.240 kb on + strand at 259.240 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 257,495 + PS417_01165 0.77 +0.7 257,495 + PS417_01165 0.77 +0.3 257,500 - PS417_01165 0.77 +0.3 257,552 + PS417_01165 0.79 +0.1 257,552 + PS417_01165 0.79 +0.1 257,552 + PS417_01165 0.79 +0.8 257,553 - PS417_01165 0.79 +0.5 257,553 - PS417_01165 0.79 -0.2 257,724 - PS417_01165 0.87 +0.5 257,724 - PS417_01165 0.87 +0.8 257,919 + +1.3 257,920 - +1.7 258,144 + +0.7 258,145 - -0.1 258,244 + -1.6 258,247 - -1.1 258,345 + -0.9 258,345 + +0.9 258,379 + -0.7 259,236 + -2.4 259,237 - -0.0 259,237 - +0.7 259,237 - +1.1 259,240 + -0.0 259,240 + +1.6 259,240 + -0.6 259,240 + +1.6
Or see this region's nucleotide sequence