Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3958 and Echvi_3959 are separated by 3 nucleotides Echvi_3959 and Echvi_3960 are separated by 111 nucleotides Echvi_3960 and Echvi_3961 are separated by 97 nucleotides
Echvi_3958: Echvi_3958 - hypothetical protein, at 4,744,252 to 4,744,740
_3958
Echvi_3959: Echvi_3959 - dihydrodipicolinate synthase, at 4,744,744 to 4,745,604
_3959
Echvi_3960: Echvi_3960 - Histone H1-like protein Hc1., at 4,745,716 to 4,745,892
_3960
Echvi_3961: Echvi_3961 - 7-keto-8-aminopelargonate synthetase and related enzymes, at 4,745,990 to 4,747,240
_3961
Position (kb)
4745
4746 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4745.609 kb on - strand at 4745.620 kb on + strand at 4745.620 kb on + strand at 4745.620 kb on + strand at 4745.620 kb on + strand at 4745.653 kb on + strand at 4745.654 kb on - strand at 4745.655 kb on + strand at 4745.655 kb on + strand at 4745.656 kb on - strand at 4745.656 kb on - strand at 4745.656 kb on - strand at 4745.656 kb on - strand at 4745.656 kb on - strand at 4745.656 kb on - strand at 4745.656 kb on - strand at 4745.682 kb on - strand at 4745.712 kb on + strand at 4745.712 kb on + strand at 4745.712 kb on + strand at 4745.713 kb on - strand at 4745.714 kb on + strand at 4745.714 kb on + strand at 4745.714 kb on + strand at 4745.715 kb on - strand at 4745.717 kb on + strand at 4745.725 kb on - strand at 4745.766 kb on + strand, within Echvi_3960 at 4745.802 kb on + strand, within Echvi_3960 at 4745.871 kb on + strand, within Echvi_3960 at 4745.959 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,745,609 - +0.1 4,745,620 + +1.0 4,745,620 + +2.0 4,745,620 + -0.4 4,745,620 + -0.5 4,745,653 + -1.6 4,745,654 - +0.1 4,745,655 + -1.5 4,745,655 + -0.9 4,745,656 - -2.4 4,745,656 - +0.1 4,745,656 - +0.5 4,745,656 - -0.4 4,745,656 - +0.5 4,745,656 - -0.2 4,745,656 - -1.2 4,745,682 - -0.6 4,745,712 + +0.2 4,745,712 + +1.2 4,745,712 + +0.6 4,745,713 - -0.9 4,745,714 + +0.4 4,745,714 + -0.5 4,745,714 + +1.0 4,745,715 - -0.1 4,745,717 + +0.2 4,745,725 - +0.3 4,745,766 + Echvi_3960 0.28 -2.5 4,745,802 + Echvi_3960 0.49 -1.1 4,745,871 + Echvi_3960 0.88 -2.8 4,745,959 + +0.2
Or see this region's nucleotide sequence