Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3896 and Echvi_3897 overlap by 3291 nucleotides Echvi_3897 and Echvi_3898 overlap by 1 nucleotides Echvi_3898 and Echvi_3899 are separated by 170 nucleotides Echvi_3899 and Echvi_3900 are separated by 957 nucleotides
Echvi_3896: Echvi_3896 - PAP2 superfamily., at 4,660,570 to 4,664,363
_3896
Echvi_3897: Echvi_3897 - hypothetical protein, at 4,661,073 to 4,661,360
_3897
Echvi_3898: Echvi_3898 - Transposase and inactivated derivatives, at 4,661,360 to 4,661,701
_3898
Echvi_3899: Echvi_3899 - Transposase and inactivated derivatives, at 4,661,872 to 4,663,425
_3899
Echvi_3900: Echvi_3900 - Thiol-disulfide isomerase and thioredoxins, at 4,664,383 to 4,665,273
_3900
Position (kb)
4661
4662
4663
4664 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4660.884 kb on + strand at 4660.885 kb on - strand at 4660.927 kb on - strand at 4660.927 kb on - strand at 4660.943 kb on + strand at 4660.944 kb on - strand at 4661.013 kb on - strand, within Echvi_3896 at 4661.013 kb on - strand, within Echvi_3896 at 4661.015 kb on - strand, within Echvi_3896 at 4661.020 kb on - strand, within Echvi_3896 at 4661.020 kb on - strand, within Echvi_3896 at 4663.474 kb on + strand at 4663.475 kb on - strand at 4663.475 kb on - strand at 4663.476 kb on + strand at 4663.476 kb on + strand at 4663.488 kb on - strand at 4663.647 kb on + strand at 4663.671 kb on - strand at 4663.741 kb on - strand at 4663.808 kb on + strand at 4663.808 kb on + strand at 4663.809 kb on - strand at 4663.818 kb on + strand at 4663.818 kb on + strand at 4663.830 kb on - strand at 4664.139 kb on + strand at 4664.161 kb on - strand at 4664.162 kb on + strand at 4664.219 kb on - strand at 4664.287 kb on + strand at 4664.320 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,660,884 + -1.4 4,660,885 - +0.4 4,660,927 - -3.0 4,660,927 - -0.6 4,660,943 + -1.4 4,660,944 - -0.0 4,661,013 - Echvi_3896 0.12 -2.3 4,661,013 - Echvi_3896 0.12 -0.0 4,661,015 - Echvi_3896 0.12 -0.4 4,661,020 - Echvi_3896 0.12 +0.6 4,661,020 - Echvi_3896 0.12 +0.7 4,663,474 + -0.7 4,663,475 - +0.1 4,663,475 - +1.4 4,663,476 + -0.8 4,663,476 + +0.8 4,663,488 - +0.5 4,663,647 + -2.6 4,663,671 - -0.0 4,663,741 - +1.2 4,663,808 + -0.1 4,663,808 + +0.7 4,663,809 - -0.4 4,663,818 + -1.0 4,663,818 + -1.0 4,663,830 - -0.7 4,664,139 + +0.4 4,664,161 - +0.6 4,664,162 + -1.2 4,664,219 - -0.4 4,664,287 + -0.3 4,664,320 - -0.5
Or see this region's nucleotide sequence