Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21210

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
106,097	+		CA264_21200	0.15	-0.5
106,097	+		CA264_21200	0.15	+0.0
106,098	-		CA264_21200	0.15	-0.9
106,129	+		CA264_21200	0.20	+0.1
106,136	+		CA264_21200	0.21	-0.2
106,157	+		CA264_21200	0.25	-1.0
106,175	+		CA264_21200	0.28	-0.2
106,176	-		CA264_21200	0.28	-0.2
106,316	+		CA264_21200	0.52	+0.1
106,316	+		CA264_21200	0.52	+0.0
106,317	-		CA264_21200	0.52	+0.6
106,364	+		CA264_21200	0.60	-0.1
106,365	-		CA264_21200	0.60	+1.3
106,365	-		CA264_21200	0.60	-0.4
106,381	-		CA264_21200	0.63	-0.0
106,483	+		CA264_21200	0.80	+0.6
106,484	-		CA264_21200	0.81	+0.6
106,484	-		CA264_21200	0.81	+1.3
106,484	-		CA264_21200	0.81	-0.1
106,502	+		CA264_21200	0.84	-1.3
106,503	-		CA264_21200	0.84	+0.3
106,503	-		CA264_21200	0.84	-0.4
106,504	+		CA264_21200	0.84	+0.3
106,515	-		CA264_21200	0.86	+1.8
106,515	-		CA264_21200	0.86	-0.3
106,604	+				-0.7
106,605	-				-1.1
106,607	-				+0.8
106,607	-				+0.9
106,607	-				+0.2
106,607	-				+0.0
106,609	+				+0.6
106,610	-				+0.3
106,610	-				-0.5
106,611	+				-1.1
106,611	+				-0.9
106,611	+				+0.4
106,611	+				+0.2
106,612	-				-0.7
106,612	-				+0.0
106,613	+				-0.2
106,613	+				+0.1
106,614	-				+0.3
106,614	-				-0.3
106,628	-				+1.0
106,630	+				-0.4
106,631	-				-0.9
106,647	-				+0.4
106,671	+		CA264_21205	0.15	-0.0
106,671	+		CA264_21205	0.15	-0.2
106,672	-		CA264_21205	0.16	+0.8
106,672	-		CA264_21205	0.16	+0.3
106,672	-		CA264_21205	0.16	+0.3
106,672	-		CA264_21205	0.16	+0.2
106,674	+		CA264_21205	0.16	-0.8
106,674	+		CA264_21205	0.16	-0.6
106,675	-		CA264_21205	0.17	-0.7
106,676	+		CA264_21205	0.17	-2.3
106,808	+		CA264_21205	0.53	+0.5
106,808	+		CA264_21205	0.53	-0.9
106,829	+		CA264_21205	0.59	-0.2
106,892	+		CA264_21205	0.76	+0.1
106,978	-				-0.2
106,979	+				-0.5
107,082	-				+0.6
107,092	+				-0.2
107,093	-				-0.3
107,094	+				-0.7
107,095	-				-0.1
107,095	-				+0.3
107,131	+				+1.1
107,153	+				-0.8
107,160	-				-0.1
107,185	+		CA264_21210	0.10	+0.1
107,185	+		CA264_21210	0.10	+0.1
107,221	+		CA264_21210	0.13	-0.1
107,246	-		CA264_21210	0.15	+0.0
107,246	-		CA264_21210	0.15	-1.8
107,286	+		CA264_21210	0.18	-0.3
107,323	-		CA264_21210	0.21	-0.0
107,323	-		CA264_21210	0.21	-2.5
107,349	+		CA264_21210	0.23	+1.8
107,409	+		CA264_21210	0.28	-0.3
107,409	+		CA264_21210	0.28	-0.3
107,409	+		CA264_21210	0.28	-0.7
107,410	-		CA264_21210	0.28	-0.9
107,412	+		CA264_21210	0.28	-0.3
107,412	+		CA264_21210	0.28	-0.7
107,440	+		CA264_21210	0.30	-0.2
107,441	-		CA264_21210	0.30	-0.7
107,444	-		CA264_21210	0.30	-0.3
107,444	-		CA264_21210	0.30	+1.1
107,612	+		CA264_21210	0.44	+1.0
107,670	-		CA264_21210	0.48	+0.2
107,771	+		CA264_21210	0.56	-0.0
107,771	+		CA264_21210	0.56	+0.0
107,772	-		CA264_21210	0.56	+0.5
107,910	-		CA264_21210	0.67	+0.4
107,974	+		CA264_21210	0.72	+1.2
107,975	-		CA264_21210	0.72	-0.2
107,978	+		CA264_21210	0.73	-0.2
107,978	+		CA264_21210	0.73	-1.2
107,997	-		CA264_21210	0.74	+0.7
108,086	+		CA264_21210	0.81	+0.3
108,086	+		CA264_21210	0.81	+0.4
108,086	+		CA264_21210	0.81	+0.5
108,087	-		CA264_21210	0.81	+0.3
108,087	-		CA264_21210	0.81	+0.6
108,089	-		CA264_21210	0.81	-1.5
108,089	-		CA264_21210	0.81	-0.4
108,106	+		CA264_21210	0.83	-0.5
108,106	+		CA264_21210	0.83	-0.6
108,106	+		CA264_21210	0.83	-0.5
108,107	-		CA264_21210	0.83	+0.2
108,107	-		CA264_21210	0.83	-0.1
108,107	-		CA264_21210	0.83	-0.3
108,111	+		CA264_21210	0.83	-0.2
108,112	-		CA264_21210	0.83	-0.2
108,116	+		CA264_21210	0.83	+0.1
108,116	+		CA264_21210	0.83	-0.5
108,122	-		CA264_21210	0.84	-0.3
108,122	-		CA264_21210	0.84	-0.3
108,124	-		CA264_21210	0.84	+0.1
108,124	-		CA264_21210	0.84	+1.1
108,131	+		CA264_21210	0.85	+0.6
108,131	+		CA264_21210	0.85	-0.4
108,133	+		CA264_21210	0.85	+0.8
108,134	-		CA264_21210	0.85	+0.6
108,200	-				-0.2
108,233	+				-0.6
108,252	-				-0.0
108,286	-				+0.4
108,293	-				+0.6
108,302	+				-0.7
108,303	-				+2.1
108,303	-				+0.5
108,319	+				+0.1
108,343	+				-0.8
108,412	-		CA264_21215	0.20	-0.0
108,467	+		CA264_21215	0.32	+0.1
108,468	-		CA264_21215	0.32	-0.2
108,557	+		CA264_21215	0.52	+0.0
108,558	-		CA264_21215	0.52	-0.1
108,558	-		CA264_21215	0.52	-0.2
108,567	+		CA264_21215	0.54	-0.7
108,567	+		CA264_21215	0.54	+0.0
108,568	-		CA264_21215	0.54	+0.2
108,568	-		CA264_21215	0.54	+0.4
108,568	-		CA264_21215	0.54	-0.4
108,568	-		CA264_21215	0.54	+0.9
108,568	-		CA264_21215	0.54	-0.0
108,580	+		CA264_21215	0.57	-0.4
108,590	+		CA264_21215	0.59	-0.2
108,590	+		CA264_21215	0.59	+0.7
108,591	-		CA264_21215	0.59	-1.6
108,628	+		CA264_21215	0.67	-0.3
108,628	+		CA264_21215	0.67	-0.3
108,628	+		CA264_21215	0.67	-0.3
108,629	-		CA264_21215	0.67	-0.3
108,633	+		CA264_21215	0.68	+1.1
108,634	-		CA264_21215	0.68	-0.7
108,640	-		CA264_21215	0.70	+0.9
108,760	+				+0.1
108,760	+				+0.3
108,760	+				-0.2
108,761	-				-0.6
108,842	-				-0.0
108,886	+				+0.4
108,895	-				-0.3
108,908	-				+0.7
108,908	-				+0.6
108,908	-				-0.2
108,908	-				-0.6
108,957	+				-0.8
108,958	-				+0.2
108,964	+				-0.6
108,964	+				-0.0
108,964	+				-0.3
108,984	+				-0.1
108,999	-				-0.9
109,053	+		CA264_21220	0.14	-1.8
109,055	+		CA264_21220	0.14	-0.3
109,055	+		CA264_21220	0.14	-0.8
109,055	+		CA264_21220	0.14	-1.6
109,057	+		CA264_21220	0.15	-0.3
109,057	+		CA264_21220	0.15	-0.1
109,058	-		CA264_21220	0.15	+0.1
109,058	-		CA264_21220	0.15	-0.1
109,058	-		CA264_21220	0.15	-0.3
109,058	-		CA264_21220	0.15	+0.1
109,081	+		CA264_21220	0.18	-1.9
109,093	-		CA264_21220	0.19	-0.3
109,140	+		CA264_21220	0.25	-0.4
109,145	+		CA264_21220	0.26	-1.3
109,168	-		CA264_21220	0.29	-0.4
109,168	-		CA264_21220	0.29	+0.7
109,176	-		CA264_21220	0.30	-0.3
109,209	+		CA264_21220	0.34	-0.0
109,209	+		CA264_21220	0.34	+0.1
109,225	+		CA264_21220	0.36	+0.9
109,225	+		CA264_21220	0.36	+2.1
109,225	+		CA264_21220	0.36	-0.3
109,225	+		CA264_21220	0.36	+0.6
109,225	+		CA264_21220	0.36	+0.1
109,226	-		CA264_21220	0.36	-0.0
109,256	-		CA264_21220	0.40	+1.4
109,279	+		CA264_21220	0.43	-0.3
109,280	-		CA264_21220	0.43	+1.8