Experiment: m.b. Doxycycline hyclate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21080 and CA264_21085 are separated by 43 nucleotides CA264_21085 and CA264_21090 are separated by 9 nucleotides CA264_21090 and CA264_21095 are separated by 85 nucleotides
CA264_21080: CA264_21080 - heavy metal translocating P-type ATPase, at 79,185 to 81,212
_21080
CA264_21085: CA264_21085 - hypothetical protein, at 81,256 to 81,654
_21085
CA264_21090: CA264_21090 - hypothetical protein, at 81,664 to 81,999
_21090
CA264_21095: CA264_21095 - heavy metal translocating P-type ATPase, at 82,085 to 84,604
_21095
Position (kb) 81
82 Strain fitness (log2 ratio) -1
0
1
2 at 80.463 kb on - strand, within CA264_21080 at 80.463 kb on - strand, within CA264_21080 at 80.463 kb on - strand, within CA264_21080 at 80.466 kb on + strand, within CA264_21080 at 80.467 kb on - strand, within CA264_21080 at 80.467 kb on - strand, within CA264_21080 at 80.647 kb on - strand, within CA264_21080 at 80.663 kb on + strand, within CA264_21080 at 80.664 kb on - strand, within CA264_21080 at 80.834 kb on - strand, within CA264_21080 at 80.882 kb on - strand, within CA264_21080 at 80.882 kb on - strand, within CA264_21080 at 80.926 kb on + strand, within CA264_21080 at 80.926 kb on + strand, within CA264_21080 at 80.927 kb on - strand, within CA264_21080 at 81.100 kb on + strand at 81.139 kb on + strand at 81.173 kb on - strand at 81.177 kb on - strand at 81.177 kb on - strand at 81.177 kb on - strand at 81.228 kb on - strand at 81.244 kb on + strand at 81.244 kb on + strand at 81.245 kb on - strand at 81.245 kb on - strand at 81.254 kb on - strand at 81.254 kb on - strand at 81.254 kb on - strand at 81.288 kb on + strand at 81.300 kb on + strand, within CA264_21085 at 81.351 kb on + strand, within CA264_21085 at 81.351 kb on + strand, within CA264_21085 at 81.356 kb on - strand, within CA264_21085 at 81.376 kb on + strand, within CA264_21085 at 81.376 kb on + strand, within CA264_21085 at 81.418 kb on - strand, within CA264_21085 at 81.452 kb on - strand, within CA264_21085 at 81.535 kb on + strand, within CA264_21085 at 81.535 kb on + strand, within CA264_21085 at 81.536 kb on - strand, within CA264_21085 at 81.546 kb on - strand, within CA264_21085 at 81.572 kb on - strand at 81.572 kb on - strand, within CA264_21085 at 81.618 kb on + strand at 81.619 kb on - strand at 81.638 kb on + strand at 81.710 kb on - strand, within CA264_21090 at 81.744 kb on - strand, within CA264_21090 at 81.744 kb on - strand, within CA264_21090 at 81.847 kb on + strand, within CA264_21090 at 81.847 kb on + strand, within CA264_21090 at 81.847 kb on + strand, within CA264_21090 at 81.848 kb on - strand, within CA264_21090 at 81.869 kb on - strand, within CA264_21090 at 81.877 kb on - strand, within CA264_21090 at 81.877 kb on - strand, within CA264_21090 at 81.966 kb on + strand at 81.967 kb on - strand at 82.032 kb on + strand at 82.032 kb on + strand at 82.033 kb on - strand at 82.051 kb on + strand at 82.052 kb on - strand at 82.060 kb on - strand at 82.060 kb on - strand at 82.076 kb on - strand at 82.078 kb on - strand at 82.191 kb on + strand at 82.200 kb on + strand at 82.200 kb on + strand at 82.201 kb on - strand at 82.250 kb on + strand at 82.478 kb on - strand, within CA264_21095 at 82.516 kb on - strand, within CA264_21095
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.004 mg/ml remove 80,463 - CA264_21080 0.63 +1.7 80,463 - CA264_21080 0.63 -0.4 80,463 - CA264_21080 0.63 -0.0 80,466 + CA264_21080 0.63 +0.3 80,467 - CA264_21080 0.63 +0.9 80,467 - CA264_21080 0.63 +0.0 80,647 - CA264_21080 0.72 +0.3 80,663 + CA264_21080 0.73 +0.2 80,664 - CA264_21080 0.73 -0.4 80,834 - CA264_21080 0.81 +0.1 80,882 - CA264_21080 0.84 +1.8 80,882 - CA264_21080 0.84 -0.2 80,926 + CA264_21080 0.86 -0.3 80,926 + CA264_21080 0.86 -1.6 80,927 - CA264_21080 0.86 -1.0 81,100 + -0.2 81,139 + -0.2 81,173 - -0.0 81,177 - +0.3 81,177 - +0.5 81,177 - -0.5 81,228 - +0.3 81,244 + +0.2 81,244 + +0.0 81,245 - -0.1 81,245 - -0.7 81,254 - -0.6 81,254 - -0.3 81,254 - +0.5 81,288 + +1.0 81,300 + CA264_21085 0.11 +1.4 81,351 + CA264_21085 0.24 +0.3 81,351 + CA264_21085 0.24 -0.8 81,356 - CA264_21085 0.25 +0.5 81,376 + CA264_21085 0.30 +0.2 81,376 + CA264_21085 0.30 +0.7 81,418 - CA264_21085 0.41 +0.5 81,452 - CA264_21085 0.49 -1.3 81,535 + CA264_21085 0.70 -1.4 81,535 + CA264_21085 0.70 -0.3 81,536 - CA264_21085 0.70 +1.0 81,546 - CA264_21085 0.73 +2.1 81,572 - +1.4 81,572 - CA264_21085 0.79 +0.7 81,618 + -0.4 81,619 - +0.4 81,638 + -0.4 81,710 - CA264_21090 0.14 -0.6 81,744 - CA264_21090 0.24 -0.0 81,744 - CA264_21090 0.24 -0.2 81,847 + CA264_21090 0.54 +0.1 81,847 + CA264_21090 0.54 +0.2 81,847 + CA264_21090 0.54 -0.7 81,848 - CA264_21090 0.55 -0.2 81,869 - CA264_21090 0.61 +0.8 81,877 - CA264_21090 0.63 -1.3 81,877 - CA264_21090 0.63 +0.3 81,966 + +0.4 81,967 - +0.3 82,032 + +0.7 82,032 + +0.4 82,033 - -0.3 82,051 + +0.3 82,052 - -0.1 82,060 - -0.7 82,060 - +0.0 82,076 - -0.3 82,078 - -0.0 82,191 + +0.2 82,200 + +0.4 82,200 + -1.7 82,201 - +1.5 82,250 + +0.9 82,478 - CA264_21095 0.16 -0.6 82,516 - CA264_21095 0.17 +0.5
Or see this region's nucleotide sequence