Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12865

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
2,995,841	+				+0.1
2,995,903	-				-0.4
2,995,907	+				-1.1
2,996,010	+				+1.7
2,996,011	-				+0.2
2,996,024	-				-0.8
2,996,042	+				-0.1
2,996,042	+				-0.8
2,996,042	+				+0.2
2,996,043	-				-1.1
2,996,049	+				-0.9
2,996,049	+				-0.0
2,996,050	-		CA264_12855	0.10	-0.9
2,996,055	-		CA264_12855	0.12	-0.7
2,996,205	+		CA264_12855	0.74	+0.0
2,996,206	-		CA264_12855	0.74	+0.6
2,996,269	-				-0.8
2,996,538	+		CA264_12860	0.53	-0.1
2,996,539	-		CA264_12860	0.54	+0.5
2,996,562	-		CA264_12860	0.58	+1.2
2,996,634	+		CA264_12860	0.72	+0.9
2,996,634	+		CA264_12860	0.72	-0.9
2,996,634	+		CA264_12860	0.72	+1.7
2,996,727	+				+0.2
2,996,727	+				+1.4
2,996,728	-				+0.1
2,996,728	-				+0.4
2,996,803	-				-0.2
2,996,803	-				+0.3
2,996,803	-				+1.0
2,996,823	+				+0.7
2,996,823	+				-0.4
2,997,142	+		CA264_12865	0.22	+1.1
2,997,142	+		CA264_12865	0.22	-0.8
2,997,142	+		CA264_12865	0.22	+0.5
2,997,142	+		CA264_12865	0.22	-1.0
2,997,142	+		CA264_12865	0.22	-0.2
2,997,142	+		CA264_12865	0.22	-0.2
2,997,143	-		CA264_12865	0.22	+0.1
2,997,143	-		CA264_12865	0.22	-0.2
2,997,143	-		CA264_12865	0.22	-0.2
2,997,199	+		CA264_12865	0.25	+0.3
2,997,200	-		CA264_12865	0.25	+0.1
2,997,200	-		CA264_12865	0.25	+0.2
2,997,354	+		CA264_12865	0.34	-0.5
2,997,355	-		CA264_12865	0.34	+0.1
2,997,358	+		CA264_12865	0.35	-0.3
2,997,359	-		CA264_12865	0.35	-0.1
2,997,465	+		CA264_12865	0.41	-1.0
2,997,466	-		CA264_12865	0.41	-0.6
2,997,538	+		CA264_12865	0.45	+0.1
2,997,590	+		CA264_12865	0.48	+0.5
2,997,689	-		CA264_12865	0.54	+1.0
2,997,730	+		CA264_12865	0.57	-0.9
2,997,750	-		CA264_12865	0.58	-0.5
2,997,805	+		CA264_12865	0.61	+1.5
2,997,805	+		CA264_12865	0.61	+1.2
2,997,806	-		CA264_12865	0.61	-0.3
2,997,844	+		CA264_12865	0.64	-0.3
2,997,845	-		CA264_12865	0.64	-0.5
2,997,953	+		CA264_12865	0.70	+0.1
2,997,983	-		CA264_12865	0.72	-0.1
2,998,127	+		CA264_12865	0.81	-1.0
2,998,136	+		CA264_12865	0.81	-0.4
2,998,138	+		CA264_12865	0.81	-0.4
2,998,138	+		CA264_12865	0.81	-0.1
2,998,138	+		CA264_12865	0.81	-0.6
2,998,193	-		CA264_12865	0.85	-0.1
2,998,220	+		CA264_12865	0.86	-0.4
2,998,309	+				-0.2
2,998,309	+				+1.2
2,998,310	-				+0.3
2,998,310	-				-1.2
2,998,310	-				-0.4
2,998,426	-				+0.1
2,998,426	-				-0.0
2,998,428	+				-0.8
2,998,428	+				+0.1
2,998,428	+				-1.0
2,998,429	-				-0.1
2,998,455	+				+0.6
2,998,456	-				-0.7
2,998,480	-				-0.3
2,998,482	+				-0.6
2,998,483	-				+0.6
2,998,541	-				+1.2
2,998,588	-				-0.9
2,998,591	+				+0.6
2,998,631	+				-0.5
2,998,632	-				-1.2
2,998,651	+				-0.2
2,998,651	+				+0.2
2,998,652	-				+1.7
2,998,652	-				-0.6
2,998,652	-				-1.1
2,998,665	-				+0.6
2,998,666	+				-1.5
2,998,667	-				-0.3
2,998,667	-				-0.1
2,998,672	+				-0.2
2,998,672	+				-0.8
2,998,714	+				+1.1
2,998,715	-				-0.3
2,998,715	-				+1.2
2,998,717	-				-1.5
2,998,717	-				-1.2
2,998,807	+				-1.5
2,998,824	+				+0.6
2,998,825	-				+0.8
2,998,825	-				-0.4
2,998,863	+				-1.5
2,998,863	+				-0.1
2,998,873	-				-0.3
2,998,919	-				+1.6
2,999,077	-				-0.1
2,999,082	-				-0.2
2,999,176	-				+0.3
2,999,184	-				-1.3
2,999,184	-				-0.3
2,999,184	-				-0.3
2,999,332	+		CA264_12870	0.21	-0.6
2,999,337	+		CA264_12870	0.22	+1.1
2,999,337	+		CA264_12870	0.22	+0.4
2,999,338	-		CA264_12870	0.22	-1.1
2,999,338	-		CA264_12870	0.22	+0.4
2,999,365	+		CA264_12870	0.27	+0.0
2,999,365	+		CA264_12870	0.27	+0.4
2,999,366	-		CA264_12870	0.27	+0.6
2,999,443	-		CA264_12870	0.39	-0.3