Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11615

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
2,705,856	+		CA264_11610	0.34	+0.0
2,705,856	+		CA264_11610	0.34	+0.5
2,705,857	-		CA264_11610	0.34	-0.8
2,705,857	-		CA264_11610	0.34	+0.8
2,705,914	-		CA264_11610	0.38	+0.3
2,705,950	-		CA264_11610	0.41	-0.8
2,705,955	-		CA264_11610	0.41	-0.9
2,705,964	-		CA264_11610	0.42	-0.2
2,705,966	+		CA264_11610	0.42	+0.2
2,705,966	+		CA264_11610	0.42	+0.2
2,705,966	+		CA264_11610	0.42	-0.2
2,706,036	-		CA264_11610	0.47	-0.1
2,706,051	+		CA264_11610	0.48	-0.8
2,706,052	-		CA264_11610	0.48	+0.3
2,706,052	-		CA264_11610	0.48	+0.3
2,706,052	-		CA264_11610	0.48	-0.3
2,706,069	+		CA264_11610	0.49	+1.7
2,706,081	+		CA264_11610	0.50	-0.2
2,706,081	+		CA264_11610	0.50	-0.1
2,706,081	+		CA264_11610	0.50	+0.2
2,706,082	-		CA264_11610	0.50	+0.3
2,706,089	+		CA264_11610	0.50	-1.1
2,706,103	+		CA264_11610	0.51	-1.3
2,706,103	+		CA264_11610	0.51	+0.8
2,706,103	+		CA264_11610	0.51	-0.8
2,706,104	-		CA264_11610	0.51	-0.2
2,706,125	+		CA264_11610	0.53	-0.7
2,706,126	-		CA264_11610	0.53	-0.9
2,706,126	-		CA264_11610	0.53	-0.9
2,706,129	+		CA264_11610	0.53	-1.0
2,706,129	+		CA264_11610	0.53	-0.5
2,706,129	+		CA264_11610	0.53	-0.4
2,706,139	+		CA264_11610	0.54	-0.0
2,706,139	+		CA264_11610	0.54	-0.3
2,706,139	+		CA264_11610	0.54	-0.1
2,706,140	-		CA264_11610	0.54	-0.5
2,706,140	-		CA264_11610	0.54	+0.9
2,706,140	-		CA264_11610	0.54	-0.1
2,706,140	-		CA264_11610	0.54	-0.9
2,706,147	-		CA264_11610	0.54	-0.3
2,706,148	+		CA264_11610	0.54	-1.1
2,706,153	-		CA264_11610	0.55	-0.2
2,706,330	-		CA264_11610	0.67	+0.5
2,706,454	+		CA264_11610	0.75	-0.3
2,706,455	-		CA264_11610	0.75	-0.3
2,706,455	-		CA264_11610	0.75	+0.2
2,706,476	-		CA264_11610	0.77	-0.5
2,706,485	-		CA264_11610	0.77	-0.1
2,706,505	-		CA264_11610	0.79	-0.4
2,706,505	-		CA264_11610	0.79	-0.5
2,706,528	+		CA264_11610	0.80	-0.0
2,706,582	-		CA264_11610	0.84	-0.3
2,706,621	+		CA264_11610	0.87	-0.5
2,706,622	-		CA264_11610	0.87	-0.4
2,706,624	+		CA264_11610	0.87	-0.5
2,706,714	+				-0.8
2,706,714	+				+0.1
2,706,726	-				+0.3
2,706,767	+				-0.0
2,706,768	-				-1.6
2,706,800	+				-0.2
2,706,802	+				-0.0
2,706,802	+				-0.2
2,706,803	-				+0.1
2,706,803	-				+0.2
2,706,806	+				-0.7
2,706,820	+				-0.5
2,706,826	+				-0.1
2,706,893	-				-0.1
2,706,898	-				-1.0
2,706,947	-				-0.5
2,706,947	-				+0.1
2,707,063	+				-0.2
2,707,063	+				-0.3
2,707,064	-				-1.4
2,707,088	+				+0.2
2,707,112	-				+0.7
2,707,112	-				-0.3
2,707,120	-				-0.8
2,707,123	-				+0.2
2,707,152	+		CA264_11615	0.11	-0.2
2,707,168	-		CA264_11615	0.11	-1.5
2,707,179	-		CA264_11615	0.12	+0.2
2,707,214	+		CA264_11615	0.13	-0.1
2,707,252	+		CA264_11615	0.14	+0.2
2,707,269	-		CA264_11615	0.15	-1.5
2,707,319	-		CA264_11615	0.16	-0.9
2,707,354	+		CA264_11615	0.18	-0.1
2,707,412	+		CA264_11615	0.20	-0.5
2,707,413	-		CA264_11615	0.20	+0.2
2,707,424	+		CA264_11615	0.20	-0.2
2,707,425	-		CA264_11615	0.20	-0.4
2,707,456	+		CA264_11615	0.21	-0.1
2,707,520	+		CA264_11615	0.23	-0.3
2,707,524	+		CA264_11615	0.23	-0.6
2,707,531	+		CA264_11615	0.24	+0.2
2,707,532	-		CA264_11615	0.24	-0.4
2,707,559	-		CA264_11615	0.25	-0.3
2,707,559	-		CA264_11615	0.25	-0.1
2,707,627	+		CA264_11615	0.27	+0.0
2,707,694	+		CA264_11615	0.29	+0.3
2,707,694	+		CA264_11615	0.29	-0.4
2,707,695	-		CA264_11615	0.29	-0.0
2,707,816	+		CA264_11615	0.33	-0.4
2,707,816	+		CA264_11615	0.33	+0.1
2,707,817	-		CA264_11615	0.33	+0.6
2,707,817	-		CA264_11615	0.33	-0.3
2,707,895	+		CA264_11615	0.36	-0.5
2,707,895	+		CA264_11615	0.36	-0.0
2,707,896	-		CA264_11615	0.36	-0.5
2,707,911	+		CA264_11615	0.37	-0.4
2,707,936	+		CA264_11615	0.37	-0.4
2,708,070	+		CA264_11615	0.42	-0.7
2,708,071	-		CA264_11615	0.42	+1.2
2,708,071	-		CA264_11615	0.42	-0.4
2,708,097	-		CA264_11615	0.43	+1.4
2,708,142	+		CA264_11615	0.44	-0.1
2,708,144	+		CA264_11615	0.44	-1.3
2,708,215	-		CA264_11615	0.47	+0.2
2,708,237	+		CA264_11615	0.48	-0.9
2,708,242	+		CA264_11615	0.48	-0.1
2,708,343	-		CA264_11615	0.51	+1.1
2,708,354	-		CA264_11615	0.52	-0.3
2,708,412	+		CA264_11615	0.54	-1.0
2,708,487	-		CA264_11615	0.56	-0.1
2,708,491	+		CA264_11615	0.56	-0.5
2,708,492	-		CA264_11615	0.56	-0.4
2,708,492	-		CA264_11615	0.56	+1.2
2,708,495	+		CA264_11615	0.56	-0.4
2,708,495	+		CA264_11615	0.56	-0.2
2,708,495	+		CA264_11615	0.56	-0.3
2,708,562	+		CA264_11615	0.59	-0.4
2,708,749	-		CA264_11615	0.65	+0.7
2,708,766	-		CA264_11615	0.66	+0.1
2,708,825	+		CA264_11615	0.68	-0.5
2,708,825	+		CA264_11615	0.68	+0.0
2,708,836	-		CA264_11615	0.68	-0.5
2,708,836	-		CA264_11615	0.68	-0.3
2,708,916	+		CA264_11615	0.71	-0.0
2,708,981	+		CA264_11615	0.73	+0.3
2,708,986	+		CA264_11615	0.73	-0.5
2,709,045	-		CA264_11615	0.75	-0.4
2,709,049	+		CA264_11615	0.75	-0.7
2,709,049	+		CA264_11615	0.75	-0.1
2,709,050	-		CA264_11615	0.75	-0.2
2,709,056	+		CA264_11615	0.75	-0.9
2,709,100	-		CA264_11615	0.77	+0.4
2,709,115	-		CA264_11615	0.77	-1.5
2,709,115	-		CA264_11615	0.77	+0.4
2,709,131	+		CA264_11615	0.78	+0.1
2,709,132	-		CA264_11615	0.78	+0.3
2,709,158	-		CA264_11615	0.79	+0.3
2,709,166	-		CA264_11615	0.79	+0.1
2,709,236	+		CA264_11615	0.81	+0.5
2,709,262	-		CA264_11615	0.82	+0.3
2,709,350	-		CA264_11615	0.85	-1.5
2,709,401	-		CA264_11615	0.87	+0.2
2,709,447	-		CA264_11615	0.89	-0.7
2,709,461	-		CA264_11615	0.89	-1.3
2,709,502	+				-0.6
2,709,521	-				+0.3
2,709,526	+				-0.4
2,709,526	+				+0.4
2,709,547	+				-0.0
2,709,547	+				-0.3
2,709,547	+				+0.2
2,709,561	+				-0.9
2,709,622	-				+0.3
2,709,622	-				+0.5
2,709,764	-				+0.3
2,709,772	+				-0.4
2,709,804	-				-0.3
2,709,831	+				+1.4
2,709,832	-				-1.8
2,709,901	+				-0.2
2,709,952	+				-1.1
2,709,966	+				-0.8
2,710,087	+				-0.9
2,710,105	+				+0.2
2,710,179	+				-0.6
2,710,231	+				+0.2
2,710,231	+				+0.2
2,710,231	+				-0.6
2,710,262	-				+0.6
2,710,262	-				-0.1
2,710,264	+				-0.3
2,710,264	+				-0.1
2,710,264	+				-0.4
2,710,265	-				-0.4
2,710,265	-				-2.0
2,710,265	-				-1.1
2,710,265	-				-0.5
2,710,266	+				+0.8
2,710,344	+				-0.3
2,710,345	-				-0.6
2,710,345	-				-0.6
2,710,354	-				-1.9
2,710,374	+				-0.5
2,710,399	-				-0.5
2,710,420	+				-0.5
2,710,420	+				-0.3
2,710,421	-				-1.8
2,710,423	+				-0.1
2,710,431	+				-1.7
2,710,445	+				+0.1
2,710,450	+				+0.2
2,710,470	+				+0.8
2,710,471	-				-0.3
2,710,478	+				+1.4
2,710,478	+				-0.1
2,710,479	-				+0.4
2,710,479	-				-0.3
2,710,490	+				+0.4
2,710,490	+				-0.0
2,710,491	-				+0.1
2,710,491	-				+0.3
2,710,491	-				+1.0
2,710,491	-				+0.6
2,710,509	+				+0.6
2,710,524	+				+0.3
2,710,525	-				+1.3
2,710,525	-				+0.6
2,710,530	+				+1.4
2,710,530	+				+0.6
2,710,534	+				+0.7
2,710,534	+				+1.1
2,710,534	+				+0.9
2,710,535	-				+0.4
2,710,581	+				+0.5
2,710,582	-				+0.9
2,710,587	+				-0.8
2,710,587	+				+0.3
2,710,587	+				+0.8
2,710,587	+				+1.4
2,710,587	+				+0.7
2,710,592	+				+1.5
2,710,643	+				+1.7
2,710,643	+				+0.4
2,710,643	+				+0.1
2,710,644	-				+1.2
2,710,644	-				+1.5
2,710,649	+				+0.8
2,710,649	+				-0.0
2,710,650	-				+1.7
2,710,657	+				+0.6
2,710,658	-				+1.0
2,710,658	-				+0.8
2,710,658	-				+1.1
2,710,683	-				+0.7
2,710,693	+				+1.1
2,710,709	-				+0.6
2,710,712	+				+0.8
2,710,712	+				+0.1
2,710,713	-				+0.7
2,710,713	-				+1.1
2,710,741	+				+0.7
2,710,741	+				+0.5
2,710,741	+				+0.6
2,710,742	-				+0.7
2,710,742	-				+1.0
2,710,742	-				+1.1
2,710,745	+				+0.6
2,710,745	+				+0.4
2,710,745	+				+0.6
2,710,745	+				+0.2
2,710,745	+				+0.4
2,710,746	-				+0.8
2,710,746	-				+0.7
2,710,746	-				+0.0
2,710,746	-				+0.2
2,710,756	+				-0.2
2,710,757	-				+1.1
2,710,757	-				+0.7
2,710,757	-				+1.3
2,710,764	-				+0.8
2,710,764	-				+0.9