Experiment: m.b. Doxycycline hyclate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10505 and CA264_10510 overlap by 4 nucleotides CA264_10510 and CA264_10515 are separated by 332 nucleotides CA264_10515 and CA264_10520 are separated by 12 nucleotides CA264_10520 and CA264_10525 are separated by 12 nucleotides
CA264_10505: CA264_10505 - FAD-binding molybdopterin dehydrogenase, at 2,436,518 to 2,437,513
_10505
CA264_10510: CA264_10510 - (2Fe-2S)-binding protein, at 2,437,510 to 2,438,010
_10510
CA264_10515: CA264_10515 - anion permease, at 2,438,343 to 2,439,101
_10515
CA264_10520: CA264_10520 - molybdopterin synthase sulfur carrier subunit, at 2,439,114 to 2,439,356
_10520
CA264_10525: CA264_10525 - molybdenum cofactor biosynthesis protein MoaE, at 2,439,369 to 2,439,785
_10525
Position (kb)
2438
2439
2440 Strain fitness (log2 ratio)
-2
-1
0
1 at 2437.387 kb on + strand, within CA264_10505 at 2437.495 kb on + strand at 2437.497 kb on + strand at 2437.497 kb on + strand at 2437.497 kb on + strand at 2437.497 kb on + strand at 2437.497 kb on + strand at 2437.498 kb on - strand at 2437.501 kb on + strand at 2437.552 kb on + strand at 2437.561 kb on + strand, within CA264_10510 at 2437.562 kb on - strand, within CA264_10510 at 2437.562 kb on - strand, within CA264_10510 at 2437.565 kb on + strand, within CA264_10510 at 2437.566 kb on - strand, within CA264_10510 at 2437.607 kb on - strand, within CA264_10510 at 2437.607 kb on - strand, within CA264_10510 at 2437.608 kb on + strand, within CA264_10510 at 2437.660 kb on + strand, within CA264_10510 at 2437.660 kb on + strand, within CA264_10510 at 2437.661 kb on - strand, within CA264_10510 at 2437.675 kb on - strand, within CA264_10510 at 2437.729 kb on + strand, within CA264_10510 at 2437.730 kb on - strand, within CA264_10510 at 2437.730 kb on - strand, within CA264_10510 at 2437.730 kb on - strand, within CA264_10510 at 2437.987 kb on + strand at 2437.987 kb on + strand at 2437.988 kb on - strand at 2438.190 kb on - strand at 2438.190 kb on - strand at 2438.241 kb on - strand at 2438.257 kb on - strand at 2438.267 kb on - strand at 2438.307 kb on + strand at 2438.307 kb on + strand at 2438.307 kb on + strand at 2438.467 kb on + strand, within CA264_10515 at 2438.656 kb on + strand, within CA264_10515 at 2438.657 kb on - strand, within CA264_10515 at 2438.659 kb on + strand, within CA264_10515 at 2438.694 kb on + strand, within CA264_10515 at 2438.737 kb on - strand, within CA264_10515 at 2438.737 kb on - strand, within CA264_10515 at 2438.879 kb on + strand, within CA264_10515 at 2438.887 kb on + strand, within CA264_10515 at 2438.888 kb on - strand, within CA264_10515 at 2438.888 kb on - strand, within CA264_10515 at 2438.938 kb on + strand, within CA264_10515 at 2439.014 kb on + strand, within CA264_10515 at 2439.073 kb on + strand at 2439.073 kb on + strand at 2439.085 kb on - strand at 2439.121 kb on + strand at 2439.121 kb on + strand at 2439.235 kb on - strand, within CA264_10520 at 2439.263 kb on + strand, within CA264_10520 at 2439.285 kb on + strand, within CA264_10520 at 2439.344 kb on - strand at 2439.370 kb on - strand at 2439.373 kb on + strand at 2439.374 kb on - strand at 2439.378 kb on - strand at 2439.378 kb on - strand at 2439.379 kb on + strand at 2439.379 kb on + strand at 2439.380 kb on - strand at 2439.380 kb on - strand at 2439.523 kb on - strand, within CA264_10525 at 2439.523 kb on - strand, within CA264_10525 at 2439.794 kb on + strand at 2439.795 kb on - strand at 2439.795 kb on - strand at 2439.795 kb on - strand at 2439.795 kb on - strand at 2439.878 kb on + strand at 2439.883 kb on + strand at 2439.920 kb on - strand at 2440.037 kb on + strand at 2440.038 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.004 mg/ml remove 2,437,387 + CA264_10505 0.87 -0.5 2,437,495 + +1.2 2,437,497 + -1.4 2,437,497 + -0.0 2,437,497 + -0.4 2,437,497 + -1.2 2,437,497 + -0.4 2,437,498 - -0.4 2,437,501 + +0.4 2,437,552 + +0.2 2,437,561 + CA264_10510 0.10 -0.8 2,437,562 - CA264_10510 0.10 +1.2 2,437,562 - CA264_10510 0.10 -1.3 2,437,565 + CA264_10510 0.11 +0.9 2,437,566 - CA264_10510 0.11 +0.6 2,437,607 - CA264_10510 0.19 -0.1 2,437,607 - CA264_10510 0.19 +0.2 2,437,608 + CA264_10510 0.20 -2.3 2,437,660 + CA264_10510 0.30 +0.8 2,437,660 + CA264_10510 0.30 -0.5 2,437,661 - CA264_10510 0.30 +0.7 2,437,675 - CA264_10510 0.33 -0.5 2,437,729 + CA264_10510 0.44 -0.0 2,437,730 - CA264_10510 0.44 -0.6 2,437,730 - CA264_10510 0.44 -0.7 2,437,730 - CA264_10510 0.44 +0.2 2,437,987 + +0.3 2,437,987 + +1.0 2,437,988 - +0.3 2,438,190 - -0.3 2,438,190 - -0.1 2,438,241 - +0.1 2,438,257 - -0.1 2,438,267 - -0.3 2,438,307 + -1.0 2,438,307 + -0.5 2,438,307 + +0.6 2,438,467 + CA264_10515 0.16 -0.4 2,438,656 + CA264_10515 0.41 -0.2 2,438,657 - CA264_10515 0.41 +0.8 2,438,659 + CA264_10515 0.42 -0.6 2,438,694 + CA264_10515 0.46 -0.8 2,438,737 - CA264_10515 0.52 +1.4 2,438,737 - CA264_10515 0.52 -0.4 2,438,879 + CA264_10515 0.71 +0.3 2,438,887 + CA264_10515 0.72 -1.7 2,438,888 - CA264_10515 0.72 -0.0 2,438,888 - CA264_10515 0.72 -1.1 2,438,938 + CA264_10515 0.78 -0.1 2,439,014 + CA264_10515 0.88 -1.0 2,439,073 + -0.5 2,439,073 + +0.1 2,439,085 - +1.4 2,439,121 + -0.3 2,439,121 + +0.2 2,439,235 - CA264_10520 0.50 -0.7 2,439,263 + CA264_10520 0.61 -0.2 2,439,285 + CA264_10520 0.70 -0.4 2,439,344 - -0.1 2,439,370 - -0.9 2,439,373 + +0.2 2,439,374 - +1.2 2,439,378 - +0.6 2,439,378 - +0.3 2,439,379 + +1.1 2,439,379 + -0.3 2,439,380 - +0.3 2,439,380 - +0.5 2,439,523 - CA264_10525 0.37 +0.1 2,439,523 - CA264_10525 0.37 -0.2 2,439,794 + -0.2 2,439,795 - +0.2 2,439,795 - +0.2 2,439,795 - +0.0 2,439,795 - +0.1 2,439,878 + -0.1 2,439,883 + +0.1 2,439,920 - -0.5 2,440,037 + +0.2 2,440,038 - +0.0
Or see this region's nucleotide sequence