Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_09820

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
2,280,820	-		CA264_09810	0.66	-0.1
2,280,823	+		CA264_09810	0.67	+0.8
2,280,824	-		CA264_09810	0.67	-0.4
2,280,824	-		CA264_09810	0.67	+0.1
2,280,828	+		CA264_09810	0.67	-1.1
2,280,829	-		CA264_09810	0.67	-0.1
2,280,829	-		CA264_09810	0.67	-0.2
2,280,932	+		CA264_09810	0.71	+0.0
2,280,933	-		CA264_09810	0.71	+0.1
2,280,933	-		CA264_09810	0.71	-0.4
2,281,006	-		CA264_09810	0.75	-0.3
2,281,006	-		CA264_09810	0.75	+0.2
2,281,036	+		CA264_09810	0.76	-0.3
2,281,036	+		CA264_09810	0.76	-0.3
2,281,036	+		CA264_09810	0.76	-1.3
2,281,037	-		CA264_09810	0.76	-0.7
2,281,049	+		CA264_09810	0.76	+0.2
2,281,049	+		CA264_09810	0.76	-0.2
2,281,050	-		CA264_09810	0.77	-1.1
2,281,050	-		CA264_09810	0.77	+0.6
2,281,050	-		CA264_09810	0.77	+1.5
2,281,050	-		CA264_09810	0.77	+0.2
2,281,050	-		CA264_09810	0.77	+0.3
2,281,050	-		CA264_09810	0.77	+0.4
2,281,058	+		CA264_09810	0.77	-0.4
2,281,066	+		CA264_09810	0.77	+0.3
2,281,067	-		CA264_09810	0.77	+0.2
2,281,067	-		CA264_09810	0.77	+0.5
2,281,067	-		CA264_09810	0.77	+1.3
2,281,067	-		CA264_09810	0.77	-0.4
2,281,071	-		CA264_09810	0.77	+0.0
2,281,071	-		CA264_09810	0.77	-1.8
2,281,176	+		CA264_09810	0.82	+0.2
2,281,177	-		CA264_09810	0.82	-1.4
2,281,191	+		CA264_09810	0.83	-0.6
2,281,191	+		CA264_09810	0.83	+0.3
2,281,252	+		CA264_09810	0.85	-0.4
2,281,253	-		CA264_09810	0.85	+0.3
2,281,258	+		CA264_09810	0.86	-1.1
2,281,258	+		CA264_09810	0.86	-0.5
2,281,259	-		CA264_09810	0.86	-0.5
2,281,259	-		CA264_09810	0.86	-2.3
2,281,301	+		CA264_09810	0.88	-0.5
2,281,302	-		CA264_09810	0.88	-0.5
2,281,302	-		CA264_09810	0.88	+0.6
2,281,306	+		CA264_09810	0.88	+0.5
2,281,306	+		CA264_09810	0.88	+0.2
2,281,306	+		CA264_09810	0.88	-0.1
2,281,306	+		CA264_09810	0.88	+0.1
2,281,339	-		CA264_09810	0.89	-0.4
2,281,373	+				-0.6
2,281,373	+				-0.3
2,281,427	-				-0.1
2,281,479	-				-0.3
2,281,490	+				-2.4
2,281,548	-				+0.7
2,281,548	-				-0.3
2,281,561	-				+1.7
2,281,562	+				+2.6
2,281,572	-				-0.2
2,281,572	-				+1.0
2,281,575	+				-0.6
2,281,594	+				-0.3
2,281,610	+				+0.6
2,281,695	+		CA264_09815	0.56	-0.2
2,281,695	+		CA264_09815	0.56	+1.4
2,281,713	+		CA264_09815	0.66	-0.4
2,281,714	-		CA264_09815	0.66	+0.2
2,281,779	+				-1.3
2,281,789	-				-0.1
2,281,814	+		CA264_09820	0.14	-0.2
2,281,814	+		CA264_09820	0.14	+0.5
2,281,860	+		CA264_09820	0.37	-0.4
2,281,861	-		CA264_09820	0.37	-1.7
2,281,875	+		CA264_09820	0.44	-0.2
2,281,900	+		CA264_09820	0.57	-0.3
2,281,934	+		CA264_09820	0.74	-1.8
2,281,935	-		CA264_09820	0.75	-0.3
2,282,001	+				+0.3
2,282,038	-				+0.4
2,282,069	+				-0.2
2,282,070	-				-0.1
2,282,163	-				-0.1
2,282,174	-				-0.2
2,282,178	+				+0.3
2,282,179	-				-0.8
2,282,179	-				-1.5
2,282,181	-				-0.1
2,282,181	-				-0.3
2,282,181	-				-0.7
2,282,360	+		CA264_09825	0.12	-0.0
2,282,360	+		CA264_09825	0.12	-1.8
2,282,362	+		CA264_09825	0.12	-0.2
2,282,362	+		CA264_09825	0.12	+1.0
2,282,381	+		CA264_09825	0.13	+0.4
2,282,415	+		CA264_09825	0.14	+0.8
2,282,429	+		CA264_09825	0.15	+0.4
2,282,457	+		CA264_09825	0.16	-0.4
2,282,457	+		CA264_09825	0.16	-0.2
2,282,603	+		CA264_09825	0.22	-0.2
2,282,632	-		CA264_09825	0.23	+1.5
2,282,632	-		CA264_09825	0.23	-0.1
2,282,635	+		CA264_09825	0.23	+0.7
2,282,635	+		CA264_09825	0.23	+0.2
2,282,635	+		CA264_09825	0.23	-0.5
2,282,635	+		CA264_09825	0.23	-0.6
2,282,635	+		CA264_09825	0.23	+0.5
2,282,636	-		CA264_09825	0.23	+1.4
2,282,669	+		CA264_09825	0.24	-0.1
2,282,718	+		CA264_09825	0.26	+0.6
2,282,718	+		CA264_09825	0.26	-0.6
2,282,720	+		CA264_09825	0.27	-0.4
2,282,721	-		CA264_09825	0.27	-0.0
2,282,721	-		CA264_09825	0.27	-0.1
2,282,721	-		CA264_09825	0.27	+0.4
2,282,721	-		CA264_09825	0.27	-1.1
2,282,730	+		CA264_09825	0.27	+0.7
2,282,731	-		CA264_09825	0.27	-1.6
2,282,731	-		CA264_09825	0.27	+0.4
2,282,731	-		CA264_09825	0.27	-0.6
2,282,732	+		CA264_09825	0.27	+0.9
2,282,762	+		CA264_09825	0.28	-0.6
2,282,762	+		CA264_09825	0.28	-0.3
2,282,775	-		CA264_09825	0.29	-0.4
2,282,780	+		CA264_09825	0.29	-0.3
2,282,780	+		CA264_09825	0.29	+0.2
2,282,780	+		CA264_09825	0.29	+0.2
2,282,781	-		CA264_09825	0.29	+0.8
2,282,781	-		CA264_09825	0.29	+0.8
2,282,781	-		CA264_09825	0.29	-0.6
2,282,826	+		CA264_09825	0.31	-0.2
2,282,828	+		CA264_09825	0.31	-0.8
2,282,831	+		CA264_09825	0.31	+0.5
2,282,832	-		CA264_09825	0.31	+0.3
2,282,871	-		CA264_09825	0.33	-0.2
2,282,876	-		CA264_09825	0.33	+0.3
2,282,927	+		CA264_09825	0.35	-0.0
2,282,928	-		CA264_09825	0.35	+0.2
2,282,928	-		CA264_09825	0.35	-0.3
2,282,928	-		CA264_09825	0.35	+0.6
2,282,932	+		CA264_09825	0.35	+1.4
2,282,932	+		CA264_09825	0.35	-0.1
2,282,932	+		CA264_09825	0.35	-0.3
2,282,932	+		CA264_09825	0.35	+0.4
2,282,932	+		CA264_09825	0.35	-0.3
2,282,972	-		CA264_09825	0.37	-0.6