Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08045

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,858,078	+				+0.0
1,858,131	+				-0.0
1,858,141	-				-0.0
1,858,144	+				-0.1
1,858,144	+				+0.1
1,858,144	+				-0.3
1,858,173	+				-0.6
1,858,173	+				-0.6
1,858,418	-		CA264_08040	0.43	-3.4
1,858,584	+		CA264_08040	0.74	-1.9
1,858,645	-		CA264_08040	0.85	-1.7
1,858,762	-				-0.0
1,858,787	+				+0.5
1,858,790	+				+1.4
1,858,790	+				-0.5
1,858,790	+				-0.3
1,858,791	-				+0.6
1,858,791	-				-0.2
1,858,793	-				+0.2
1,858,869	+				-1.1
1,858,949	-				+1.4
1,858,976	-		CA264_08045	0.15	-0.2
1,859,079	+		CA264_08045	0.38	+0.6
1,859,123	+		CA264_08045	0.47	-0.4
1,859,216	+		CA264_08045	0.68	-0.6
1,859,217	-		CA264_08045	0.68	-0.6
1,859,246	+		CA264_08045	0.74	-1.0
1,859,246	+		CA264_08045	0.74	-0.9
1,859,246	+		CA264_08045	0.74	-0.8
1,859,247	-		CA264_08045	0.75	-0.2
1,859,309	-		CA264_08045	0.88	-0.0
1,859,356	+				+1.5
1,859,357	-				+0.0
1,859,361	-				-0.1
1,859,361	-				+0.2
1,859,385	+				-0.8
1,859,393	-				-0.4
1,859,394	+				+0.6
1,859,395	-				+1.3
1,859,442	-				+0.7
1,859,446	+				-1.1
1,859,446	+				+0.5
1,859,447	-				-0.0
1,859,687	-		CA264_08050	0.67	+1.1
1,859,774	-				+0.9
1,859,819	-				-1.3
1,859,835	-				-0.1
1,859,838	-				-0.3
1,859,838	-				-0.0
1,859,838	-				-0.5
1,859,847	-				+0.8
1,859,849	+				+0.1
1,859,849	+				-0.8
1,859,851	+				-0.4
1,859,851	+				-0.6
1,859,853	+				+0.4
1,859,854	-				-1.6
1,859,854	-				+1.0
1,859,855	+				-0.4
1,859,856	+				-0.8
1,859,856	-				-1.0
1,859,856	-				-0.4
1,859,856	-				-0.5
1,859,856	-				-0.2
1,859,925	+				+1.1
1,859,925	+				+0.6
1,859,925	+				-1.6
1,859,925	+				-0.4
1,859,925	+				+0.0
1,859,925	+				-0.5
1,859,926	-				+0.1
1,859,926	-				+2.0
1,859,926	-				+0.1
1,859,926	-				-0.2
1,859,926	-				-1.3
1,860,002	+		CA264_08055	0.12	-0.4
1,860,003	-		CA264_08055	0.12	-0.2
1,860,044	-		CA264_08055	0.16	+0.8
1,860,102	+		CA264_08055	0.22	+0.4
1,860,111	+		CA264_08055	0.23	-0.2
1,860,112	-		CA264_08055	0.23	-0.7
1,860,114	+		CA264_08055	0.23	-0.4
1,860,148	+		CA264_08055	0.26	+0.1
1,860,233	-		CA264_08055	0.34	+0.1
1,860,281	+		CA264_08055	0.39	-0.2