Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07280

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,679,857	-				+0.4
1,679,887	+				-0.4
1,679,888	-				+0.0
1,679,889	+				-0.6
1,679,890	-				-0.1
1,679,890	-				+0.4
1,679,892	-				+1.4
1,679,892	-				+0.3
1,679,927	+				-0.4
1,679,927	+				-0.4
1,679,929	+				+0.9
1,679,932	+				-0.1
1,679,933	-				+0.9
1,679,933	-				+0.1
1,679,936	+				+0.6
1,679,938	+				-0.6
1,679,939	-				+0.0
1,679,943	+				+0.5
1,679,959	+				+1.4
1,679,961	+				-0.0
1,679,969	-				-1.3
1,679,977	-				-0.6
1,679,977	-				-0.1
1,679,980	+				-1.8
1,679,980	+				+0.1
1,679,980	+				+1.1
1,679,980	+				+0.2
1,679,981	-				+0.6
1,680,010	-				-0.1
1,680,183	+				+0.6
1,680,250	+		CA264_07275	0.10	-0.4
1,680,309	+		CA264_07275	0.19	+0.6
1,680,310	-		CA264_07275	0.20	+2.0
1,680,310	-		CA264_07275	0.20	+0.0
1,680,376	+		CA264_07275	0.30	+0.7
1,680,377	-		CA264_07275	0.30	-0.2
1,680,393	-		CA264_07275	0.33	+0.1
1,680,440	-		CA264_07275	0.40	-0.2
1,680,496	-		CA264_07275	0.49	-0.7
1,680,522	+		CA264_07275	0.53	+0.1
1,680,537	-		CA264_07275	0.56	+0.1
1,680,541	+		CA264_07275	0.56	+0.4
1,680,541	+		CA264_07275	0.56	-0.4
1,680,541	+		CA264_07275	0.56	+0.3
1,680,542	-		CA264_07275	0.56	+0.9
1,680,553	+		CA264_07275	0.58	+0.3
1,680,553	+		CA264_07275	0.58	-0.2
1,680,554	-		CA264_07275	0.58	+0.9
1,680,557	+		CA264_07275	0.59	+1.9
1,680,557	+		CA264_07275	0.59	-0.3
1,680,558	-		CA264_07275	0.59	-0.0
1,680,647	-		CA264_07275	0.73	-0.4
1,680,681	-		CA264_07275	0.78	-0.2
1,680,696	+		CA264_07275	0.81	-0.6
1,680,706	+		CA264_07275	0.82	+0.7
1,680,727	+		CA264_07275	0.86	+0.5
1,680,734	+		CA264_07275	0.87	+0.8
1,680,734	+		CA264_07275	0.87	+0.3
1,680,774	-				-1.3
1,680,774	-				+0.4
1,680,815	-				-1.9
1,680,815	-				+1.8
1,680,819	+				+1.1
1,680,853	-				-0.4
1,680,904	+		CA264_07280	0.10	+0.8
1,680,904	+		CA264_07280	0.10	+0.4
1,680,924	+		CA264_07280	0.13	-0.3
1,680,924	+		CA264_07280	0.13	+0.2
1,680,961	-		CA264_07280	0.17	-0.5
1,680,991	+		CA264_07280	0.20	+0.3
1,681,027	+		CA264_07280	0.25	+0.1
1,681,054	-		CA264_07280	0.28	-0.6
1,681,218	+		CA264_07280	0.47	+0.8
1,681,218	+		CA264_07280	0.47	+0.5
1,681,288	+		CA264_07280	0.56	+0.8
1,681,289	-		CA264_07280	0.56	-0.1
1,681,296	-		CA264_07280	0.57	+0.6
1,681,296	-		CA264_07280	0.57	+0.1
1,681,440	+		CA264_07280	0.74	+0.8
1,681,441	-		CA264_07280	0.74	+0.1
1,681,503	+		CA264_07280	0.81	+0.7
1,681,506	+		CA264_07280	0.81	+0.3
1,681,529	+		CA264_07280	0.84	+0.8
1,681,577	+		CA264_07280	0.90	-0.1
1,681,578	-		CA264_07280	0.90	+0.1
1,681,594	+				-0.2
1,681,644	+				+0.1
1,681,645	-				-0.1
1,681,655	+				-0.0
1,681,676	+				-0.5
1,681,707	+				-0.3
1,681,708	-				-0.1
1,681,714	-				-0.1
1,681,771	-				+0.5
1,681,772	+				+0.4
1,681,773	-				+0.8
1,681,773	-				+0.4
1,681,780	+				+0.5
1,681,786	-				+0.3
1,681,827	+				+0.6
1,681,827	+				-0.2
1,681,827	+				-0.6
1,681,828	-				+0.8
1,681,831	+				+0.6
1,681,831	+				-0.2
1,681,832	-				+0.0
1,681,832	-				+0.1
1,681,834	-				+0.6
1,681,839	+				+0.1
1,681,839	+				+0.3
1,681,839	+				-1.0
1,681,839	+				-0.0
1,681,840	-				+0.1
1,681,853	+				+0.8
1,681,854	-				+0.4
1,681,854	-				-0.2
1,681,899	-				-1.0
1,681,899	-				+1.1
1,681,940	-				+0.1
1,682,018	-				+0.0
1,682,018	-				+0.5
1,682,018	-				-0.1
1,682,082	+		CA264_07285	0.12	+0.1
1,682,105	-		CA264_07285	0.14	-0.5
1,682,170	-		CA264_07285	0.17	-0.0
1,682,171	+		CA264_07285	0.17	+2.6
1,682,171	+		CA264_07285	0.17	-0.8
1,682,171	+		CA264_07285	0.17	+0.1
1,682,172	-		CA264_07285	0.17	-0.9
1,682,172	-		CA264_07285	0.17	+0.5
1,682,175	+		CA264_07285	0.17	+0.4
1,682,175	+		CA264_07285	0.17	+0.9
1,682,176	-		CA264_07285	0.17	-0.1
1,682,182	+		CA264_07285	0.18	+0.8
1,682,182	+		CA264_07285	0.18	-0.5
1,682,183	-		CA264_07285	0.18	-0.5
1,682,241	+		CA264_07285	0.21	+0.2
1,682,241	+		CA264_07285	0.21	+0.2
1,682,250	-		CA264_07285	0.21	+0.6
1,682,315	+		CA264_07285	0.25	+0.1
1,682,352	-		CA264_07285	0.27	-0.6
1,682,365	+		CA264_07285	0.28	+0.0
1,682,380	-		CA264_07285	0.28	-0.6
1,682,445	+		CA264_07285	0.32	+0.0
1,682,452	-		CA264_07285	0.32	+0.1
1,682,518	+		CA264_07285	0.36	-0.1
1,682,518	+		CA264_07285	0.36	+0.7
1,682,518	+		CA264_07285	0.36	+0.1
1,682,519	-		CA264_07285	0.36	+0.4
1,682,519	-		CA264_07285	0.36	+1.7
1,682,519	-		CA264_07285	0.36	-0.4
1,682,519	-		CA264_07285	0.36	+0.0
1,682,519	-		CA264_07285	0.36	+0.0
1,682,634	-		CA264_07285	0.42	+0.6
1,682,652	-		CA264_07285	0.43	-1.6