Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06345

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,472,677	-				-2.1
1,472,719	-		CA264_06340	0.12	-0.4
1,472,799	-		CA264_06340	0.22	-0.5
1,472,799	-		CA264_06340	0.22	-1.2
1,472,807	-		CA264_06340	0.23	-0.8
1,472,807	-		CA264_06340	0.23	+1.1
1,472,807	-		CA264_06340	0.23	-0.5
1,472,815	-		CA264_06340	0.24	-1.1
1,472,838	+		CA264_06340	0.26	-1.2
1,473,105	-		CA264_06340	0.59	-1.2
1,473,137	-		CA264_06340	0.63	-1.0
1,473,282	+		CA264_06340	0.80	-0.1
1,473,295	+		CA264_06340	0.82	-1.6
1,473,307	+		CA264_06340	0.83	-1.0
1,473,375	-				+0.8
1,473,466	-				-1.6
1,473,472	+				-1.9
1,473,473	-				-1.1
1,473,473	-				-0.6
1,473,501	+				-2.1
1,473,503	+				-2.7
1,473,503	+				-0.9
1,473,504	-				-1.6
1,473,511	-				-1.5
1,473,524	-				-2.9
1,473,524	-				-1.3
1,473,524	-				-1.9
1,473,622	+				-0.7
1,473,623	-				-0.2
1,473,643	+				+0.1
1,473,663	-				+3.0
1,473,674	-				+2.5
1,473,789	+				+2.2
1,473,789	+				+2.4
1,473,789	+				+1.9
1,473,789	+				+1.6
1,473,790	-				+0.6
1,473,794	+				+1.3
1,473,990	-		CA264_06345	0.19	+1.9
1,473,990	-		CA264_06345	0.19	+1.7
1,474,089	-		CA264_06345	0.24	+1.9
1,474,312	+		CA264_06345	0.37	+1.1
1,474,313	-		CA264_06345	0.37	+3.1
1,474,358	+		CA264_06345	0.40	+2.0
1,474,358	+		CA264_06345	0.40	+2.0
1,474,358	+		CA264_06345	0.40	+1.5
1,474,359	-		CA264_06345	0.40	+1.8
1,474,359	-		CA264_06345	0.40	+2.5
1,474,359	-		CA264_06345	0.40	+2.1
1,474,397	+		CA264_06345	0.42	+1.5
1,474,397	+		CA264_06345	0.42	+1.6
1,474,397	+		CA264_06345	0.42	+2.1
1,474,398	-		CA264_06345	0.42	+2.6
1,474,398	-		CA264_06345	0.42	+1.9
1,474,398	-		CA264_06345	0.42	+2.0
1,474,400	+		CA264_06345	0.42	+3.2
1,474,400	+		CA264_06345	0.42	+2.1
1,474,400	+		CA264_06345	0.42	+1.7
1,474,401	-		CA264_06345	0.42	+2.6
1,474,401	-		CA264_06345	0.42	+2.2
1,474,401	-		CA264_06345	0.42	+1.9
1,474,401	-		CA264_06345	0.42	+1.5
1,474,402	+		CA264_06345	0.42	+1.9
1,474,443	-		CA264_06345	0.44	+1.6
1,474,443	-		CA264_06345	0.44	+2.0
1,474,455	+		CA264_06345	0.45	+1.5
1,474,456	-		CA264_06345	0.45	+1.6
1,474,456	-		CA264_06345	0.45	+2.5
1,474,501	+		CA264_06345	0.48	+2.3
1,474,502	-		CA264_06345	0.48	+2.7
1,474,502	-		CA264_06345	0.48	+2.8
1,474,506	+		CA264_06345	0.48	+1.7
1,474,532	+				+3.2
1,474,533	-		CA264_06345	0.49	+2.0
1,474,540	+		CA264_06345	0.50	+1.6
1,474,540	+		CA264_06345	0.50	+1.5
1,474,540	+		CA264_06345	0.50	+2.5
1,474,542	+		CA264_06345	0.50	+2.2
1,474,542	+		CA264_06345	0.50	+1.9
1,474,542	+		CA264_06345	0.50	+1.7
1,474,543	-		CA264_06345	0.50	+2.0
1,474,543	-		CA264_06345	0.50	+3.1
1,474,543	-		CA264_06345	0.50	+0.9
1,474,676	-		CA264_06345	0.57	+1.2
1,474,676	-		CA264_06345	0.57	+1.8
1,474,717	+		CA264_06345	0.60	+1.8
1,474,717	+		CA264_06345	0.60	+1.8
1,474,717	+		CA264_06345	0.60	+2.1
1,474,718	-		CA264_06345	0.60	+1.8
1,474,718	-		CA264_06345	0.60	+2.7
1,474,796	-		CA264_06345	0.64	+1.7
1,474,891	+		CA264_06345	0.69	+1.8
1,474,891	+		CA264_06345	0.69	+2.3
1,474,891	+		CA264_06345	0.69	+1.4
1,474,892	-		CA264_06345	0.70	+1.9
1,474,892	-		CA264_06345	0.70	+1.8
1,474,931	+		CA264_06345	0.72	+1.9
1,474,932	-		CA264_06345	0.72	+1.9
1,474,946	+		CA264_06345	0.73	+1.9
1,474,969	+		CA264_06345	0.74	+2.1
1,475,012	-		CA264_06345	0.76	+1.8
1,475,204	-		CA264_06345	0.87	+1.1
1,475,222	+		CA264_06345	0.88	+1.8
1,475,223	-		CA264_06345	0.88	+1.7
1,475,223	-		CA264_06345	0.88	+2.3
1,475,223	-		CA264_06345	0.88	+2.2
1,475,223	-		CA264_06345	0.88	+2.2
1,475,277	-				+1.7
1,475,277	-				+2.8
1,475,285	-				+2.7
1,475,298	+				+1.7
1,475,298	+				+1.8
1,475,298	+				+1.7
1,475,357	+				+1.5
1,475,358	-				+1.8
1,475,410	+				+1.8
1,475,413	+				+2.3
1,475,488	-				+1.1