Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05945

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,387,850	+				+1.4
1,387,850	+				-0.0
1,387,864	-				-0.7
1,387,864	-				+0.3
1,387,868	+				-1.1
1,387,873	+				-0.8
1,387,880	+				-0.3
1,387,883	-				-2.1
1,387,883	-				+0.4
1,388,008	-		CA264_05940	0.23	+0.4
1,388,038	-		CA264_05940	0.28	-1.2
1,388,052	-		CA264_05940	0.30	+0.1
1,388,064	+		CA264_05940	0.33	-0.1
1,388,064	+		CA264_05940	0.33	+0.2
1,388,096	+		CA264_05940	0.38	-0.1
1,388,133	+		CA264_05940	0.45	+0.1
1,388,134	-		CA264_05940	0.45	-1.3
1,388,144	+		CA264_05940	0.47	+0.8
1,388,145	-		CA264_05940	0.47	-0.2
1,388,145	-		CA264_05940	0.47	-0.6
1,388,230	-		CA264_05940	0.63	-0.4
1,388,272	+		CA264_05940	0.70	-0.6
1,388,289	-		CA264_05940	0.73	+0.1
1,388,291	+		CA264_05940	0.74	-1.4
1,388,292	-		CA264_05940	0.74	-0.3
1,388,359	+		CA264_05940	0.86	-0.1
1,388,360	-		CA264_05940	0.86	+0.1
1,388,360	-		CA264_05940	0.86	-0.9
1,388,455	+				+0.4
1,388,456	-				-0.2
1,388,459	-				+0.2
1,388,518	-				-0.3
1,388,525	-				-0.3
1,388,525	-				+0.0
1,388,535	+				+0.1
1,388,567	+				-0.5
1,388,568	-				-0.3
1,388,568	-				+0.3
1,388,576	-				+0.5
1,388,576	-				+0.2
1,388,631	-				+2.4
1,388,637	+				+0.5
1,388,638	-				-0.7
1,388,653	+				-0.4
1,388,655	+				-0.0
1,388,655	+				-0.5
1,388,655	+				+0.7
1,388,655	+				+0.3
1,388,656	-				-0.0
1,388,659	+				-0.6
1,388,659	+				+0.4
1,388,659	+				+0.6
1,388,660	-				-0.8
1,388,660	-				-1.6
1,388,660	-				-0.3
1,388,660	-				+0.8
1,388,660	-				-0.0
1,388,660	-				-1.3
1,388,660	-				+0.2
1,388,663	+				+0.8
1,388,682	-				-0.0
1,388,685	-				+0.1
1,388,685	-				-0.3
1,388,690	+				+0.5
1,388,691	-				+0.5
1,388,693	+				+1.5
1,388,694	-				-0.3
1,388,724	-				+0.1
1,388,791	+		CA264_05945	0.11	+2.0
1,388,791	+		CA264_05945	0.11	+0.3
1,388,791	+		CA264_05945	0.11	+0.0
1,388,792	-		CA264_05945	0.11	-0.3
1,388,814	+		CA264_05945	0.13	-0.1
1,388,818	-		CA264_05945	0.14	+0.3
1,388,850	+		CA264_05945	0.16	+0.4
1,388,866	-		CA264_05945	0.18	+0.7
1,388,950	-		CA264_05945	0.26	-1.2
1,389,068	-		CA264_05945	0.37	+0.3
1,389,176	-		CA264_05945	0.47	+0.8
1,389,195	+		CA264_05945	0.48	-0.8
1,389,200	+		CA264_05945	0.49	+0.9
1,389,201	-		CA264_05945	0.49	-1.4
1,389,210	-		CA264_05945	0.50	+0.3
1,389,224	+		CA264_05945	0.51	-0.4
1,389,224	+		CA264_05945	0.51	-0.1
1,389,331	+		CA264_05945	0.61	-0.6
1,389,332	-		CA264_05945	0.61	-0.0
1,389,406	-		CA264_05945	0.68	+0.2
1,389,406	-		CA264_05945	0.68	-0.7
1,389,477	+		CA264_05945	0.74	-0.1
1,389,478	-		CA264_05945	0.74	-1.5
1,389,749	+				-1.1
1,389,860	+				-0.4
1,389,860	+				-1.0
1,389,861	-				-0.4
1,390,098	-		CA264_05950	0.25	+0.9
1,390,234	-		CA264_05950	0.39	-0.1
1,390,308	+		CA264_05950	0.46	+0.7
1,390,342	+		CA264_05950	0.50	-1.1
1,390,342	+		CA264_05950	0.50	+1.4
1,390,342	+		CA264_05950	0.50	+0.3
1,390,343	-		CA264_05950	0.50	+0.5
1,390,474	-		CA264_05950	0.63	-0.0
1,390,474	-		CA264_05950	0.63	+0.1
1,390,474	-		CA264_05950	0.63	-0.2
1,390,476	+		CA264_05950	0.63	-0.8
1,390,476	+		CA264_05950	0.63	+0.5
1,390,477	-		CA264_05950	0.63	-0.1
1,390,477	-		CA264_05950	0.63	+0.2
1,390,478	+		CA264_05950	0.64	+0.8
1,390,479	-		CA264_05950	0.64	-0.4
1,390,479	-		CA264_05950	0.64	+1.0
1,390,479	-		CA264_05950	0.64	-0.2
1,390,494	-		CA264_05950	0.65	+0.4
1,390,532	+		CA264_05950	0.69	-0.5
1,390,533	-		CA264_05950	0.69	+0.9
1,390,634	-		CA264_05950	0.79	-0.3
1,390,721	+		CA264_05950	0.88	-0.4
1,390,721	+		CA264_05950	0.88	-0.4
1,390,722	-		CA264_05950	0.88	-0.5
1,390,722	-		CA264_05950	0.88	-0.3