Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03400

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
792,378	+				+1.7
792,382	+				+0.3
792,383	-				-0.9
792,383	-				-0.1
792,435	+				-0.8
792,436	-				-0.4
792,436	-				-0.2
792,436	-				-1.0
792,544	-		CA264_03395	0.19	-0.0
792,693	+		CA264_03395	0.40	-0.8
792,707	+		CA264_03395	0.42	-0.4
792,707	+		CA264_03395	0.42	-0.3
792,742	-		CA264_03395	0.47	+0.7
792,742	-		CA264_03395	0.47	+0.7
792,777	+		CA264_03395	0.52	+0.1
792,832	-		CA264_03395	0.60	+0.2
792,869	+		CA264_03395	0.65	+0.7
792,869	+		CA264_03395	0.65	+0.2
792,903	+		CA264_03395	0.70	-0.0
792,904	-		CA264_03395	0.70	-0.8
792,939	-		CA264_03395	0.75	+1.2
792,983	+		CA264_03395	0.81	+0.2
793,028	-		CA264_03395	0.87	-0.8
793,028	-		CA264_03395	0.87	+1.4
793,032	+		CA264_03395	0.88	-0.5
793,032	+		CA264_03395	0.88	+0.6
793,033	-		CA264_03395	0.88	-1.2
793,035	-		CA264_03395	0.88	-1.9
793,079	+				+0.1
793,113	+				+0.5
793,194	+				+1.0
793,195	-				-0.0
793,195	-				-0.8
793,195	-				-1.0
793,195	-				-0.6
793,196	+				+0.3
793,196	+				-0.4
793,197	-				-0.0
793,197	-				+0.0
793,292	+				-0.8
793,352	+				+0.2
793,365	-				+0.3
793,389	+				-0.8
793,390	-				-0.6
793,397	-				+0.3
793,397	-				-0.1
793,440	+		CA264_03400	0.16	+0.5
793,450	-		CA264_03400	0.18	-0.6
793,483	+		CA264_03400	0.24	-1.4
793,487	-		CA264_03400	0.25	-0.3
793,557	+		CA264_03400	0.38	-0.1
793,557	+		CA264_03400	0.38	+2.1
793,558	-		CA264_03400	0.38	-0.8
793,558	-		CA264_03400	0.38	+1.4
793,563	+		CA264_03400	0.39	-0.2
793,668	-		CA264_03400	0.59	+0.0
793,844	-				+0.6
793,892	-				-0.5
793,903	+				-1.1
793,904	-				-2.3
793,906	-				-1.1
793,929	-				+0.3
793,968	+		CA264_03405	0.14	+1.6
794,214	+		CA264_03405	0.54	+1.0
794,215	-		CA264_03405	0.54	+0.5
794,237	+		CA264_03405	0.58	-0.4
794,237	+		CA264_03405	0.58	+0.0
794,238	-		CA264_03405	0.58	-1.4
794,251	-		CA264_03405	0.60	-0.1
794,251	-		CA264_03405	0.60	-0.5
794,255	+		CA264_03405	0.60	+0.1
794,256	-		CA264_03405	0.61	-1.2
794,257	+		CA264_03405	0.61	+0.7
794,482	+				-1.1
794,483	-				-0.2
794,483	-				-0.6
794,484	+				-0.6
794,485	-				-0.1
794,485	-				+0.4
794,485	-				+0.5
794,485	-				+0.7
794,604	-				-0.2
794,663	+				-0.2
794,663	+				+0.8
794,676	-		CA264_03410	0.11	-0.3
794,720	+		CA264_03410	0.15	-0.1
794,721	-		CA264_03410	0.15	+0.8
794,769	+		CA264_03410	0.21	+0.3