Experiment: m.b. Doxycycline hyclate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03380 and CA264_03385 are separated by 215 nucleotides CA264_03385 and CA264_03390 are separated by 247 nucleotides CA264_03390 and CA264_03395 are separated by 122 nucleotides
CA264_03380: CA264_03380 - hypothetical protein, at 790,528 to 791,238
_03380
CA264_03385: CA264_03385 - hypothetical protein, at 791,454 to 791,675
_03385
CA264_03390: CA264_03390 - hypothetical protein, at 791,923 to 792,291
_03390
CA264_03395: CA264_03395 - phospholipase, at 792,414 to 793,115
_03395
Position (kb) 791
792 Strain fitness (log2 ratio) -1
0
1 at 790.490 kb on - strand at 790.513 kb on + strand at 790.514 kb on - strand at 790.517 kb on + strand at 790.518 kb on - strand at 790.527 kb on + strand at 790.527 kb on + strand at 790.630 kb on + strand, within CA264_03380 at 790.630 kb on + strand, within CA264_03380 at 790.648 kb on + strand, within CA264_03380 at 790.810 kb on + strand, within CA264_03380 at 790.811 kb on - strand, within CA264_03380 at 790.966 kb on + strand, within CA264_03380 at 790.966 kb on + strand, within CA264_03380 at 790.967 kb on - strand, within CA264_03380 at 791.002 kb on + strand, within CA264_03380 at 791.005 kb on + strand, within CA264_03380 at 791.006 kb on - strand, within CA264_03380 at 791.083 kb on + strand, within CA264_03380 at 791.084 kb on - strand, within CA264_03380 at 791.162 kb on - strand, within CA264_03380 at 791.303 kb on + strand at 791.310 kb on + strand at 791.311 kb on - strand at 791.378 kb on - strand at 791.413 kb on + strand at 791.439 kb on + strand at 791.439 kb on + strand at 791.444 kb on + strand at 791.613 kb on + strand, within CA264_03385 at 791.614 kb on - strand, within CA264_03385 at 791.618 kb on + strand, within CA264_03385 at 791.619 kb on - strand, within CA264_03385 at 791.675 kb on + strand at 791.691 kb on + strand at 791.714 kb on + strand at 791.714 kb on + strand at 791.715 kb on - strand at 791.813 kb on + strand at 791.858 kb on + strand at 791.859 kb on - strand at 791.869 kb on + strand at 791.875 kb on + strand at 791.876 kb on - strand at 791.922 kb on + strand at 791.965 kb on - strand, within CA264_03390 at 792.031 kb on - strand, within CA264_03390 at 792.203 kb on - strand, within CA264_03390 at 792.287 kb on - strand at 792.290 kb on - strand at 792.298 kb on + strand at 792.298 kb on + strand at 792.301 kb on - strand at 792.378 kb on + strand at 792.382 kb on + strand at 792.383 kb on - strand at 792.383 kb on - strand at 792.435 kb on + strand at 792.436 kb on - strand at 792.436 kb on - strand at 792.436 kb on - strand at 792.544 kb on - strand, within CA264_03395
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.004 mg/ml remove 790,490 - +0.2 790,513 + +0.5 790,514 - -0.1 790,517 + +0.1 790,518 - -0.3 790,527 + +0.0 790,527 + -0.2 790,630 + CA264_03380 0.14 -0.3 790,630 + CA264_03380 0.14 -0.9 790,648 + CA264_03380 0.17 -0.7 790,810 + CA264_03380 0.40 -0.1 790,811 - CA264_03380 0.40 +0.3 790,966 + CA264_03380 0.62 +0.5 790,966 + CA264_03380 0.62 +0.1 790,967 - CA264_03380 0.62 -0.1 791,002 + CA264_03380 0.67 +0.3 791,005 + CA264_03380 0.67 +0.8 791,006 - CA264_03380 0.67 -0.3 791,083 + CA264_03380 0.78 -0.5 791,084 - CA264_03380 0.78 +0.1 791,162 - CA264_03380 0.89 +0.2 791,303 + -0.4 791,310 + -0.1 791,311 - +0.5 791,378 - -0.8 791,413 + +0.0 791,439 + +0.1 791,439 + -0.2 791,444 + +0.2 791,613 + CA264_03385 0.72 -1.1 791,614 - CA264_03385 0.72 -0.4 791,618 + CA264_03385 0.74 +0.1 791,619 - CA264_03385 0.74 -1.1 791,675 + -0.4 791,691 + -0.1 791,714 + +0.4 791,714 + -0.5 791,715 - -0.6 791,813 + +1.0 791,858 + +0.4 791,859 - +0.1 791,869 + -0.2 791,875 + -0.2 791,876 - -0.2 791,922 + -0.1 791,965 - CA264_03390 0.11 -0.5 792,031 - CA264_03390 0.29 +0.8 792,203 - CA264_03390 0.76 -0.3 792,287 - -0.3 792,290 - +0.1 792,298 + -0.0 792,298 + +0.9 792,301 - -0.1 792,378 + +1.7 792,382 + +0.3 792,383 - -0.9 792,383 - -0.1 792,435 + -0.8 792,436 - -0.4 792,436 - -0.2 792,436 - -1.0 792,544 - CA264_03395 0.19 -0.0
Or see this region's nucleotide sequence