Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2994

Experiment: KB with Acridine orange 3.125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 3.125 ug/ml
3,586,264	+		Psyr_2993	0.54	+0.2
3,586,264	+		Psyr_2993	0.54	-3.7
3,586,265	-		Psyr_2993	0.54	-1.1
3,586,265	-		Psyr_2993	0.54	+0.2
3,586,330	+		Psyr_2993	0.58	+0.7
3,586,360	-		Psyr_2993	0.59	+0.2
3,586,754	+		Psyr_2993	0.81	+3.5
3,586,754	+		Psyr_2993	0.81	+2.5
3,586,754	+		Psyr_2993	0.81	-2.3
3,586,754	+		Psyr_2993	0.81	+3.9
3,586,754	+		Psyr_2993	0.81	-0.9
3,586,754	+		Psyr_2993	0.81	-0.5
3,586,754	+		Psyr_2993	0.81	+0.9
3,586,754	+		Psyr_2993	0.81	-1.0
3,586,754	+		Psyr_2993	0.81	-0.4
3,586,754	+		Psyr_2993	0.81	-2.1
3,586,755	-		Psyr_2993	0.81	+0.2
3,586,755	-		Psyr_2993	0.81	+0.1
3,586,755	-		Psyr_2993	0.81	+3.7
3,586,755	-		Psyr_2993	0.81	-0.5
3,586,755	-		Psyr_2993	0.81	-0.6
3,586,786	+		Psyr_2993	0.83	-0.5
3,586,786	+		Psyr_2993	0.83	+2.8
3,586,787	-		Psyr_2993	0.83	-0.6
3,586,787	-		Psyr_2993	0.83	+1.7
3,586,861	-		Psyr_2993	0.87	-0.2
3,586,982	+				-0.6
3,586,983	-				+0.8
3,587,039	-				+3.0
3,587,039	-				-1.8
3,587,365	-		Psyr_2994	0.13	+3.2
3,587,365	-		Psyr_2994	0.13	-2.0
3,587,564	+		Psyr_2994	0.23	-2.8
3,587,715	-		Psyr_2994	0.30	+0.7
3,587,904	-		Psyr_2994	0.39	-2.0
3,588,510	-		Psyr_2994	0.68	-0.2
3,588,854	+		Psyr_2994	0.85	+0.9
3,588,855	-		Psyr_2994	0.85	-0.6
3,588,958	+				-1.4
3,588,959	-				+1.8
3,588,959	-				-1.1
3,588,959	-				+1.8
3,589,122	+				-2.5
3,589,122	+				-3.0
3,589,123	-				-3.6
3,589,175	+				+0.2
3,589,175	+				+0.2
3,589,176	-				+0.8
3,589,176	-				+0.2
3,589,253	-				+3.4
3,589,253	-				+1.4
3,589,253	-				+0.2
3,589,283	-				-2.2
3,589,344	+				-2.4
3,589,516	+		Psyr_2995	0.13	-0.9
3,589,517	-		Psyr_2995	0.13	-2.1
3,589,562	+		Psyr_2995	0.14	+3.7
3,589,601	-		Psyr_2995	0.16	+3.9
3,589,663	+		Psyr_2995	0.18	-1.2
3,589,664	-		Psyr_2995	0.18	+2.5
3,589,664	-		Psyr_2995	0.18	-3.1
3,589,664	-		Psyr_2995	0.18	-1.4
3,589,676	-		Psyr_2995	0.18	-1.2
3,589,708	+		Psyr_2995	0.20	-0.7
3,589,708	+		Psyr_2995	0.20	-0.6
3,589,795	+		Psyr_2995	0.23	-4.2
3,589,795	+		Psyr_2995	0.23	+4.5
3,589,796	-		Psyr_2995	0.23	+1.4