Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2530

Experiment: KB with Acridine orange 3.125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 3.125 ug/ml
2,940,908	+		Psyr_2529	0.45	-2.8
2,940,908	+		Psyr_2529	0.45	-3.2
2,940,908	+		Psyr_2529	0.45	-2.1
2,940,909	-		Psyr_2529	0.45	+0.1
2,940,909	-		Psyr_2529	0.45	+1.3
2,940,909	-		Psyr_2529	0.45	+0.2
2,941,332	-		Psyr_2529	0.78	+3.5
2,941,486	+				+3.2
2,941,486	+				-0.8
2,941,487	-				-0.1
2,941,487	-				-0.3
2,941,699	+				+1.9
2,941,699	+				+1.4
2,941,699	+				+2.0
2,941,700	-				-1.4
2,941,792	+		Psyr_2530	0.14	-2.9
2,941,792	+		Psyr_2530	0.14	+1.8
2,941,867	+		Psyr_2530	0.20	-0.4
2,941,867	+		Psyr_2530	0.20	-4.4
2,941,867	+		Psyr_2530	0.20	-1.2
2,941,868	-		Psyr_2530	0.20	-0.4
2,942,131	+		Psyr_2530	0.40	-0.4
2,942,132	-		Psyr_2530	0.40	+3.2
2,942,146	+		Psyr_2530	0.41	+0.4
2,942,146	+		Psyr_2530	0.41	+4.5
2,942,146	+		Psyr_2530	0.41	+0.2
2,942,146	+		Psyr_2530	0.41	+1.2
2,942,254	+		Psyr_2530	0.50	+3.7
2,942,254	+		Psyr_2530	0.50	+3.0
2,942,255	-		Psyr_2530	0.50	-0.4
2,942,255	-		Psyr_2530	0.50	-2.1
2,942,255	-		Psyr_2530	0.50	+2.1
2,942,286	-		Psyr_2530	0.52	-1.0
2,942,287	+		Psyr_2530	0.52	+4.2
2,942,288	-		Psyr_2530	0.52	-2.8
2,942,368	+		Psyr_2530	0.58	+2.0
2,942,444	-		Psyr_2530	0.64	+0.2
2,942,564	-		Psyr_2530	0.73	+0.0
2,942,589	-		Psyr_2530	0.75	-3.1
2,942,668	+		Psyr_2530	0.81	-3.5
2,942,668	+		Psyr_2530	0.81	+0.2
2,942,668	+		Psyr_2530	0.81	+0.8
2,942,668	+		Psyr_2530	0.81	+3.8
2,942,668	+		Psyr_2530	0.81	-1.2
2,942,668	+		Psyr_2530	0.81	+0.4
2,942,668	+		Psyr_2530	0.81	+1.8
2,942,668	+		Psyr_2530	0.81	-4.7
2,942,668	+		Psyr_2530	0.81	-2.9
2,942,668	+		Psyr_2530	0.81	-1.1
2,942,669	-		Psyr_2530	0.81	+1.8
2,942,669	-		Psyr_2530	0.81	-2.8
2,942,669	-		Psyr_2530	0.81	+0.6
2,942,669	-		Psyr_2530	0.81	-0.2
2,942,669	-		Psyr_2530	0.81	+2.8
2,942,669	-		Psyr_2530	0.81	+0.4
2,942,741	-		Psyr_2530	0.87	+0.2
2,942,901	+				-1.4
2,942,901	+				+2.8
2,942,901	+				-2.6
2,942,902	-				+0.4
2,942,902	-				+0.2
2,942,935	-				-4.1
2,943,063	+				-0.3
2,943,064	-				-1.2
2,943,198	+		Psyr_2531	0.11	-2.6
2,943,201	+		Psyr_2531	0.11	+0.6
2,943,257	+		Psyr_2531	0.17	+1.8
2,943,257	+		Psyr_2531	0.17	-0.4
2,943,257	+		Psyr_2531	0.17	+3.0
2,943,257	+		Psyr_2531	0.17	-1.9
2,943,258	-		Psyr_2531	0.17	-1.2
2,943,258	-		Psyr_2531	0.17	-1.4