Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1764

Experiment: KB with Acridine orange 3.125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 3.125 ug/ml
2,004,288	-		Psyr_1762	0.52	-2.1
2,004,314	-		Psyr_1762	0.56	-3.4
2,004,322	+		Psyr_1762	0.57	+0.3
2,004,322	+		Psyr_1762	0.57	+3.6
2,004,323	-		Psyr_1762	0.57	-2.7
2,004,323	-		Psyr_1762	0.57	+3.3
2,004,522	+		Psyr_1762	0.83	-3.8
2,004,522	+		Psyr_1762	0.83	+0.3
2,004,522	+		Psyr_1762	0.83	+0.3
2,004,522	+		Psyr_1762	0.83	-4.8
2,004,522	+		Psyr_1762	0.83	-1.0
2,004,522	+		Psyr_1762	0.83	-1.9
2,004,522	+		Psyr_1762	0.83	-3.8
2,004,522	+		Psyr_1762	0.83	+3.1
2,004,523	-		Psyr_1762	0.83	-5.0
2,004,523	-		Psyr_1762	0.83	-2.6
2,004,523	-		Psyr_1762	0.83	-2.7
2,004,523	-		Psyr_1762	0.83	-4.1
2,004,523	-		Psyr_1762	0.83	-1.8
2,004,523	-		Psyr_1762	0.83	-1.7
2,004,523	-		Psyr_1762	0.83	+0.0
2,004,523	-		Psyr_1762	0.83	-1.3
2,004,523	-		Psyr_1762	0.83	-2.6
2,004,526	+		Psyr_1762	0.84	-1.2
2,004,526	+		Psyr_1762	0.84	+2.9
2,004,527	-		Psyr_1762	0.84	-4.5
2,004,527	-		Psyr_1762	0.84	-2.8
2,004,527	-		Psyr_1762	0.84	-0.9
2,004,632	+				-0.2
2,004,633	-				-3.3
2,004,633	-				-3.3
2,005,197	+				+2.9
2,005,197	+				-2.8
2,005,197	+				-0.1
2,006,072	+				-0.6
2,006,072	+				+3.9
2,006,072	+				+3.1
2,006,073	-				+0.5
2,006,073	-				-2.7
2,006,073	-				-0.0
2,006,073	-				+4.6
2,006,099	-		Psyr_1765	0.14	-3.1
2,006,183	+		Psyr_1765	0.30	-4.2
2,006,184	-		Psyr_1765	0.30	-2.8
2,006,276	-		Psyr_1765	0.46	-1.2
2,006,437	+		Psyr_1765	0.76	+0.3
2,006,438	-		Psyr_1765	0.76	-1.6
2,006,459	+		Psyr_1765	0.80	-1.2
2,006,550	-				+0.2
2,006,616	+				-0.7
2,006,616	+				-0.8
2,006,617	-				+2.5
2,006,617	-				+2.3
2,006,710	-		Psyr_1766	0.44	+0.3
2,006,710	-		Psyr_1766	0.44	-1.3
2,006,710	-		Psyr_1766	0.44	+4.4
2,006,839	+				-2.2
2,006,858	+				-0.7
2,006,858	+				-0.5
2,006,858	+				+0.7
2,006,859	-				-3.5
2,006,859	-				+1.9
2,006,859	-				-4.3
2,006,859	-				-0.9
2,006,871	-				-2.0
2,006,887	+				-0.3
2,006,888	-				-3.0
2,006,890	+				+0.8
2,006,903	+				+2.3
2,006,903	+				-0.5
2,006,903	+				+0.4
2,006,903	+				-4.2
2,006,903	+				+3.3
2,006,904	-				+0.5
2,006,904	-				+3.6
2,006,904	-				-2.8
2,006,905	+				+0.3
2,006,906	-				+0.7
2,006,906	-				+0.3
2,006,984	-				+0.6