Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1614

Experiment: KB with Acridine orange 3.125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 3.125 ug/ml
1,815,764	-				-4.2
1,815,775	-				-0.5
1,815,790	+				+0.4
1,815,791	-				+1.4
1,815,791	-				+0.5
1,815,791	-				+2.4
1,815,791	-				-0.2
1,815,889	+				+0.4
1,815,982	+		Psyr_1613	0.13	+0.4
1,815,982	+		Psyr_1613	0.13	-0.6
1,815,983	-		Psyr_1613	0.13	+0.4
1,815,983	-		Psyr_1613	0.13	+0.4
1,816,168	+		Psyr_1613	0.38	-3.0
1,816,169	-		Psyr_1613	0.38	-1.2
1,816,169	-		Psyr_1613	0.38	-3.6
1,816,473	-		Psyr_1613	0.79	-3.6
1,816,636	-				+3.4
1,816,637	+				-1.6
1,816,637	+				-2.8
1,816,637	+				+0.4
1,816,638	-				+0.7
1,816,638	-				+2.7
1,816,638	-				+1.4
1,816,638	-				+4.7
1,816,638	-				-4.5
1,816,638	-				-1.0
1,816,638	-				-0.4
1,816,638	-				+0.0
1,816,638	-				-2.1
1,816,638	-				-0.6
1,816,638	-				-3.5
1,816,638	-				-2.6
1,816,638	-				+0.4
1,816,638	-				-0.4
1,816,671	+				+0.4
1,816,671	+				+0.4
1,816,671	+				-3.1
1,816,671	+				-2.0
1,816,672	-				-1.0
1,816,672	-				-0.7
1,816,674	-				+0.4
1,816,674	-				-2.3
1,816,674	-				-0.9
1,816,766	+				-2.2
1,816,766	+				+0.4
1,816,890	+		Psyr_1614	0.15	-3.9
1,816,890	+		Psyr_1614	0.15	-4.9
1,816,890	+		Psyr_1614	0.15	-4.4
1,816,891	-		Psyr_1614	0.15	-2.6
1,817,202	+		Psyr_1614	0.49	-3.9
1,817,202	+		Psyr_1614	0.49	-2.7
1,817,203	-		Psyr_1614	0.49	-3.9
1,817,315	-		Psyr_1614	0.61	+0.0
1,817,315	-		Psyr_1614	0.61	+0.4
1,817,358	+		Psyr_1614	0.65	-2.2
1,817,525	+		Psyr_1614	0.83	-1.1
1,817,664	+				-1.6
1,817,664	+				+2.4
1,817,664	+				+0.1
1,817,665	-				-3.7
1,817,665	-				-3.1
1,817,665	-				+2.4
1,817,665	-				-0.4
1,817,675	+				+0.5
1,817,675	+				-0.6
1,817,675	+				-1.4
1,817,675	+				+2.4
1,817,676	-				+2.9
1,817,676	-				-1.5
1,817,679	+				+0.9
1,817,680	-				-4.5
1,817,680	-				+4.3
1,817,680	-				+2.4
1,817,680	-				+0.4
1,817,711	+				-1.0
1,817,711	+				-0.1
1,817,711	+				-0.9
1,817,711	+				-0.9
1,817,712	-				-0.5
1,817,712	-				-0.2
1,817,712	-				+1.4
1,817,712	-				-0.3
1,817,712	-				-1.0
1,817,712	-				-0.4
1,817,808	-				-0.8
1,817,997	+		Psyr_1615	0.24	+1.4
1,818,259	-		Psyr_1615	0.46	+3.8
1,818,259	-		Psyr_1615	0.46	-0.7
1,818,362	+		Psyr_1615	0.55	+0.8
1,818,362	+		Psyr_1615	0.55	-0.5
1,818,363	-		Psyr_1615	0.55	-0.5
1,818,363	-		Psyr_1615	0.55	+2.4
1,818,363	-		Psyr_1615	0.55	+0.1
1,818,417	+		Psyr_1615	0.59	-1.2
1,818,417	+		Psyr_1615	0.59	+2.9
1,818,470	-		Psyr_1615	0.64	-0.8
1,818,562	+		Psyr_1615	0.72	-2.0