Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3496

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
4,141,400	+		Echvi_3495	0.15	+0.1
4,141,400	+		Echvi_3495	0.15	+0.2
4,141,400	+		Echvi_3495	0.15	-0.1
4,141,401	-		Echvi_3495	0.15	-0.9
4,141,401	-		Echvi_3495	0.15	-0.4
4,141,427	+		Echvi_3495	0.17	-0.8
4,141,509	-		Echvi_3495	0.25	-0.8
4,141,529	+		Echvi_3495	0.27	+0.1
4,141,773	+		Echvi_3495	0.51	+0.1
4,141,774	-		Echvi_3495	0.51	+0.5
4,141,799	+		Echvi_3495	0.54	-1.5
4,141,857	+		Echvi_3495	0.59	+0.2
4,141,859	+		Echvi_3495	0.60	-0.0
4,141,859	+		Echvi_3495	0.60	-0.2
4,141,859	+		Echvi_3495	0.60	+0.3
4,141,860	-		Echvi_3495	0.60	-0.4
4,141,860	-		Echvi_3495	0.60	-0.6
4,141,860	-		Echvi_3495	0.60	+0.9
4,141,861	-		Echvi_3495	0.60	-1.9
4,141,884	-		Echvi_3495	0.62	-1.6
4,141,899	-		Echvi_3495	0.63	+0.9
4,141,988	+		Echvi_3495	0.72	-0.1
4,141,989	-		Echvi_3495	0.72	-0.3
4,141,989	-		Echvi_3495	0.72	-0.2
4,141,990	+		Echvi_3495	0.72	+0.1
4,141,990	+		Echvi_3495	0.72	-0.7
4,141,990	+		Echvi_3495	0.72	+1.8
4,141,990	+		Echvi_3495	0.72	+0.5
4,141,991	-		Echvi_3495	0.72	+0.9
4,141,991	-		Echvi_3495	0.72	-1.8
4,142,067	-		Echvi_3495	0.80	-0.1
4,142,097	+		Echvi_3495	0.83	-0.2
4,142,098	-		Echvi_3495	0.83	-0.1
4,142,098	-		Echvi_3495	0.83	-0.5
4,142,102	+		Echvi_3495	0.83	-0.4
4,142,102	+		Echvi_3495	0.83	-0.6
4,142,103	-		Echvi_3495	0.83	+0.5
4,142,106	+		Echvi_3495	0.84	-0.4
4,142,206	+				+0.2
4,142,207	-				-1.7
4,142,269	+				-0.9
4,142,321	+				+0.1
4,142,370	+				-0.8
4,142,376	+				+0.1
4,142,376	+				-0.0
4,142,376	+				-0.1
4,142,383	+				-0.2
4,142,390	+				-1.3
4,142,443	+				-1.9
4,142,443	+				-1.9
4,142,444	-				-0.9
4,142,444	-				-0.1
4,142,444	-				+0.2
4,142,445	+				+1.2
4,142,445	+				-0.1
4,142,445	+				-0.2
4,142,446	-				+0.1
4,142,463	+				+0.8
4,142,467	+				-0.4
4,142,468	-				-0.2
4,142,616	-		Echvi_3496	0.12	-0.0
4,142,625	+		Echvi_3496	0.13	-0.4
4,142,626	-		Echvi_3496	0.13	-0.5
4,142,626	-		Echvi_3496	0.13	+0.2
4,142,684	-		Echvi_3496	0.16	-0.4
4,142,727	+		Echvi_3496	0.18	-0.0
4,142,749	+		Echvi_3496	0.19	-1.0
4,142,778	-		Echvi_3496	0.21	+0.2
4,142,783	-		Echvi_3496	0.21	-0.3
4,142,806	+		Echvi_3496	0.23	-0.2
4,142,806	+		Echvi_3496	0.23	+0.1
4,142,807	-		Echvi_3496	0.23	-2.1
4,142,807	-		Echvi_3496	0.23	-1.3
4,142,807	-		Echvi_3496	0.23	-0.3
4,142,868	+		Echvi_3496	0.26	+0.6
4,142,885	+		Echvi_3496	0.27	-0.4
4,142,886	-		Echvi_3496	0.27	-0.3
4,142,886	-		Echvi_3496	0.27	-0.6
4,142,895	-		Echvi_3496	0.27	+0.3
4,142,955	-		Echvi_3496	0.31	-0.1
4,142,968	+		Echvi_3496	0.31	-0.7
4,142,972	+		Echvi_3496	0.31	-0.5
4,142,973	-				+0.8
4,143,010	-		Echvi_3496	0.34	-0.8
4,143,032	-		Echvi_3496	0.35	+1.1
4,143,032	-		Echvi_3496	0.35	-0.5
4,143,077	+		Echvi_3496	0.37	-0.7
4,143,103	-		Echvi_3496	0.39	-0.6
4,143,159	+		Echvi_3496	0.42	-0.3
4,143,159	+		Echvi_3496	0.42	-0.2
4,143,159	+		Echvi_3496	0.42	+0.4
4,143,159	+		Echvi_3496	0.42	+0.8
4,143,159	+		Echvi_3496	0.42	-1.6
4,143,159	+		Echvi_3496	0.42	-0.4
4,143,159	+		Echvi_3496	0.42	-0.6
4,143,159	+		Echvi_3496	0.42	-0.6
4,143,160	-		Echvi_3496	0.42	+0.3
4,143,160	-		Echvi_3496	0.42	+0.7
4,143,160	-		Echvi_3496	0.42	+0.9
4,143,160	-		Echvi_3496	0.42	-0.3
4,143,198	-		Echvi_3496	0.44	-0.1
4,143,289	-		Echvi_3496	0.49	-0.4
4,143,387	+		Echvi_3496	0.54	+0.0
4,143,413	-		Echvi_3496	0.55	-1.4
4,143,413	-		Echvi_3496	0.55	-0.1
4,143,455	+		Echvi_3496	0.58	+0.8
4,143,455	+		Echvi_3496	0.58	+1.1
4,143,456	-		Echvi_3496	0.58	-0.1
4,143,510	-		Echvi_3496	0.61	+0.7
4,143,605	+		Echvi_3496	0.66	-1.7
4,143,605	+		Echvi_3496	0.66	-0.8
4,143,656	+		Echvi_3496	0.68	-0.7
4,143,656	+		Echvi_3496	0.68	-1.1
4,143,695	+		Echvi_3496	0.71	-0.0
4,143,696	-		Echvi_3496	0.71	+0.8
4,143,696	-		Echvi_3496	0.71	+0.9
4,143,705	-		Echvi_3496	0.71	+0.4
4,143,734	-		Echvi_3496	0.73	+0.2
4,143,887	+		Echvi_3496	0.81	-0.4
4,143,887	+		Echvi_3496	0.81	-0.7
4,143,888	-		Echvi_3496	0.81	-0.7
4,143,888	-		Echvi_3496	0.81	+0.7
4,143,888	-		Echvi_3496	0.81	+0.2
4,143,995	-		Echvi_3496	0.87	+0.0
4,144,083	+				+0.8
4,144,088	+				-2.5
4,144,089	-				-0.1
4,144,145	+				-1.8
4,144,147	+				+0.4
4,144,147	+				-0.2
4,144,147	+				-1.2
4,144,147	+				+0.1
4,144,147	+				-0.3
4,144,148	-				+0.3
4,144,148	-				-0.1
4,144,180	+				+0.4
4,144,241	-				+0.8
4,144,241	-				+0.1
4,144,259	+				-0.6
4,144,289	-				+0.1
4,144,316	+				-0.7
4,144,316	+				+1.2
4,144,317	-				+0.3
4,144,337	-				+0.1
4,144,409	-				-0.4
4,144,425	-				-0.2
4,144,592	+				+0.5
4,144,620	+				-0.6
4,144,663	+				-1.0
4,144,663	+				+0.1
4,144,663	+				-3.8
4,144,664	-				+1.3
4,144,695	+				-0.7
4,144,695	+				-0.4
4,144,695	+				+0.7
4,144,705	-				+0.1
4,144,729	-				-0.1
4,144,745	+				-0.0
4,144,745	+				+0.2
4,144,745	+				-0.0
4,144,746	-				+1.1
4,144,746	-				+0.6
4,144,746	-				+0.2
4,144,746	-				+1.8
4,144,747	+				-0.5
4,144,747	+				-0.3
4,144,795	+				+0.7
4,144,827	-				-0.3
4,144,827	-				+1.3
4,144,857	+		Echvi_3497	0.10	+0.4
4,144,897	+		Echvi_3497	0.13	-0.4
4,145,015	-		Echvi_3497	0.20	+1.5
4,145,090	+		Echvi_3497	0.25	+0.9
4,145,097	+		Echvi_3497	0.25	-0.5
4,145,108	-		Echvi_3497	0.26	+0.4
4,145,163	+		Echvi_3497	0.29	+0.0
4,145,185	+		Echvi_3497	0.31	-0.4
4,145,185	+		Echvi_3497	0.31	-1.2
4,145,186	-		Echvi_3497	0.31	-0.4
4,145,187	+		Echvi_3497	0.31	+0.8
4,145,188	-		Echvi_3497	0.31	+2.8
4,145,188	-		Echvi_3497	0.31	+0.8
4,145,221	+		Echvi_3497	0.33	-0.1
4,145,222	-		Echvi_3497	0.33	-1.5
4,145,222	-		Echvi_3497	0.33	+1.1