Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21270 and CA264_21275 are separated by 27 nucleotides CA264_21275 and CA264_21280 are separated by 38 nucleotides CA264_21280 and CA264_21285 are separated by 62 nucleotides CA264_21285 and CA264_21290 are separated by 12 nucleotides
CA264_21270: CA264_21270 - hypothetical protein, at 120,353 to 122,167
_21270
CA264_21275: CA264_21275 - hypothetical protein, at 122,195 to 122,824
_21275
CA264_21280: CA264_21280 - hypothetical protein, at 122,863 to 123,234
_21280
CA264_21285: CA264_21285 - hypothetical protein, at 123,297 to 123,764
_21285
CA264_21290: CA264_21290 - SCO family protein, at 123,777 to 124,433
_21290
Position (kb)
122
123 Strain fitness (log2 ratio)
-2
-1
0
1 at 121.205 kb on - strand, within CA264_21270 at 121.235 kb on - strand, within CA264_21270 at 121.294 kb on + strand, within CA264_21270 at 121.295 kb on - strand, within CA264_21270 at 121.427 kb on - strand, within CA264_21270 at 121.452 kb on + strand, within CA264_21270 at 121.453 kb on - strand, within CA264_21270 at 121.472 kb on - strand, within CA264_21270 at 121.476 kb on - strand, within CA264_21270 at 121.476 kb on - strand, within CA264_21270 at 121.480 kb on - strand, within CA264_21270 at 121.480 kb on - strand, within CA264_21270 at 121.537 kb on - strand, within CA264_21270 at 121.744 kb on - strand, within CA264_21270 at 121.763 kb on + strand, within CA264_21270 at 121.818 kb on - strand, within CA264_21270 at 122.132 kb on - strand at 122.267 kb on - strand, within CA264_21275 at 122.453 kb on + strand, within CA264_21275 at 122.454 kb on - strand, within CA264_21275 at 122.464 kb on - strand, within CA264_21275 at 122.822 kb on + strand at 122.852 kb on - strand at 122.879 kb on + strand at 122.892 kb on + strand at 122.938 kb on - strand, within CA264_21280 at 122.938 kb on - strand, within CA264_21280 at 122.958 kb on - strand, within CA264_21280 at 123.100 kb on + strand, within CA264_21280 at 123.163 kb on - strand, within CA264_21280 at 123.174 kb on - strand, within CA264_21280 at 123.194 kb on - strand, within CA264_21280 at 123.319 kb on - strand at 123.323 kb on - strand at 123.329 kb on + strand at 123.449 kb on - strand, within CA264_21285 at 123.449 kb on - strand, within CA264_21285 at 123.456 kb on - strand, within CA264_21285 at 123.456 kb on - strand, within CA264_21285 at 123.491 kb on - strand, within CA264_21285 at 123.759 kb on - strand at 123.804 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 121,205 - CA264_21270 0.47 -0.2 121,235 - CA264_21270 0.49 -0.4 121,294 + CA264_21270 0.52 +1.1 121,295 - CA264_21270 0.52 -0.6 121,427 - CA264_21270 0.59 +0.7 121,452 + CA264_21270 0.61 -0.3 121,453 - CA264_21270 0.61 -0.0 121,472 - CA264_21270 0.62 +0.1 121,476 - CA264_21270 0.62 -0.9 121,476 - CA264_21270 0.62 -0.4 121,480 - CA264_21270 0.62 +0.0 121,480 - CA264_21270 0.62 -0.1 121,537 - CA264_21270 0.65 -0.4 121,744 - CA264_21270 0.77 -0.1 121,763 + CA264_21270 0.78 +1.1 121,818 - CA264_21270 0.81 -1.3 122,132 - -1.6 122,267 - CA264_21275 0.11 -1.6 122,453 + CA264_21275 0.41 -0.4 122,454 - CA264_21275 0.41 -1.0 122,464 - CA264_21275 0.43 -0.0 122,822 + +0.0 122,852 - -0.1 122,879 + -0.6 122,892 + -0.5 122,938 - CA264_21280 0.20 +0.2 122,938 - CA264_21280 0.20 +0.3 122,958 - CA264_21280 0.26 -1.0 123,100 + CA264_21280 0.64 -1.1 123,163 - CA264_21280 0.81 -0.0 123,174 - CA264_21280 0.84 +0.5 123,194 - CA264_21280 0.89 -0.1 123,319 - +0.5 123,323 - -0.1 123,329 + -1.8 123,449 - CA264_21285 0.32 +0.6 123,449 - CA264_21285 0.32 -0.3 123,456 - CA264_21285 0.34 +1.7 123,456 - CA264_21285 0.34 +0.1 123,491 - CA264_21285 0.41 +0.3 123,759 - -0.6 123,804 + -0.1
Or see this region's nucleotide sequence