Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19790 and CA264_19795 are separated by 269 nucleotides CA264_19795 and CA264_19800 are separated by 214 nucleotides
CA264_19790: CA264_19790 - acyl-CoA dehydrogenase, at 4,567,946 to 4,569,124
_19790
CA264_19795: CA264_19795 - hypothetical protein, at 4,569,394 to 4,569,900
_19795
CA264_19800: CA264_19800 - Holliday junction branch migration DNA helicase RuvB, at 4,570,115 to 4,571,158
_19800
Position (kb)
4569
4570 Strain fitness (log2 ratio)
-2
-1
0
1 at 4568.655 kb on + strand, within CA264_19790 at 4568.655 kb on + strand, within CA264_19790 at 4568.655 kb on + strand, within CA264_19790 at 4568.741 kb on + strand, within CA264_19790 at 4568.741 kb on + strand, within CA264_19790 at 4568.741 kb on + strand, within CA264_19790 at 4568.742 kb on - strand, within CA264_19790 at 4568.760 kb on - strand, within CA264_19790 at 4568.773 kb on + strand, within CA264_19790 at 4568.774 kb on - strand, within CA264_19790 at 4568.774 kb on - strand, within CA264_19790 at 4568.845 kb on + strand, within CA264_19790 at 4568.916 kb on + strand, within CA264_19790 at 4569.053 kb on + strand at 4569.053 kb on + strand at 4569.053 kb on + strand at 4569.053 kb on + strand at 4569.053 kb on + strand at 4569.157 kb on + strand at 4569.164 kb on + strand at 4569.164 kb on + strand at 4569.166 kb on + strand at 4569.205 kb on - strand at 4569.226 kb on + strand at 4569.261 kb on + strand at 4569.261 kb on + strand at 4569.265 kb on + strand at 4569.300 kb on + strand at 4569.300 kb on + strand at 4569.300 kb on + strand at 4569.301 kb on - strand at 4569.302 kb on + strand at 4569.308 kb on - strand at 4569.314 kb on - strand at 4569.317 kb on + strand at 4569.380 kb on + strand at 4569.443 kb on + strand at 4569.485 kb on + strand, within CA264_19795 at 4569.517 kb on - strand, within CA264_19795 at 4569.563 kb on + strand, within CA264_19795 at 4569.720 kb on + strand, within CA264_19795 at 4569.721 kb on - strand, within CA264_19795 at 4569.725 kb on - strand, within CA264_19795 at 4569.725 kb on - strand, within CA264_19795 at 4569.725 kb on - strand, within CA264_19795 at 4569.750 kb on + strand, within CA264_19795 at 4569.750 kb on + strand, within CA264_19795 at 4569.750 kb on + strand, within CA264_19795 at 4569.796 kb on + strand, within CA264_19795 at 4569.799 kb on - strand, within CA264_19795 at 4569.900 kb on + strand at 4569.900 kb on + strand at 4569.901 kb on - strand at 4569.901 kb on - strand at 4569.931 kb on + strand at 4569.932 kb on - strand at 4569.932 kb on - strand at 4570.074 kb on + strand at 4570.108 kb on + strand at 4570.109 kb on - strand at 4570.110 kb on + strand at 4570.110 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 4,568,655 + CA264_19790 0.60 +0.3 4,568,655 + CA264_19790 0.60 +1.0 4,568,655 + CA264_19790 0.60 -0.2 4,568,741 + CA264_19790 0.67 +0.2 4,568,741 + CA264_19790 0.67 -0.4 4,568,741 + CA264_19790 0.67 +0.1 4,568,742 - CA264_19790 0.68 -0.1 4,568,760 - CA264_19790 0.69 +0.6 4,568,773 + CA264_19790 0.70 -0.6 4,568,774 - CA264_19790 0.70 +1.0 4,568,774 - CA264_19790 0.70 -0.3 4,568,845 + CA264_19790 0.76 +0.1 4,568,916 + CA264_19790 0.82 +0.3 4,569,053 + +0.3 4,569,053 + +0.1 4,569,053 + +0.3 4,569,053 + -2.0 4,569,053 + +0.4 4,569,157 + +0.2 4,569,164 + +0.9 4,569,164 + -0.6 4,569,166 + -2.5 4,569,205 - +0.2 4,569,226 + -0.4 4,569,261 + -0.4 4,569,261 + +1.3 4,569,265 + +0.2 4,569,300 + +0.4 4,569,300 + -0.9 4,569,300 + -0.2 4,569,301 - +0.7 4,569,302 + -0.9 4,569,308 - -1.3 4,569,314 - +0.3 4,569,317 + -0.2 4,569,380 + +0.8 4,569,443 + -1.4 4,569,485 + CA264_19795 0.18 -0.2 4,569,517 - CA264_19795 0.24 +0.2 4,569,563 + CA264_19795 0.33 -1.1 4,569,720 + CA264_19795 0.64 -1.0 4,569,721 - CA264_19795 0.64 +0.6 4,569,725 - CA264_19795 0.65 -0.9 4,569,725 - CA264_19795 0.65 -0.8 4,569,725 - CA264_19795 0.65 -0.8 4,569,750 + CA264_19795 0.70 -0.8 4,569,750 + CA264_19795 0.70 -0.3 4,569,750 + CA264_19795 0.70 +1.6 4,569,796 + CA264_19795 0.79 +0.5 4,569,799 - CA264_19795 0.80 -0.5 4,569,900 + +0.3 4,569,900 + -0.0 4,569,901 - -0.3 4,569,901 - -0.5 4,569,931 + -0.8 4,569,932 - +0.3 4,569,932 - -0.0 4,570,074 + -0.7 4,570,108 + -0.8 4,570,109 - +0.3 4,570,110 + +0.1 4,570,110 + -0.6
Or see this region's nucleotide sequence