Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18725 and CA264_18730 are separated by 61 nucleotides CA264_18730 and CA264_18735 are separated by 6 nucleotides CA264_18735 and CA264_18740 overlap by 8 nucleotides
CA264_18725: CA264_18725 - phosphate transport system regulatory protein PhoU, at 4,347,678 to 4,348,403
_18725
CA264_18730: CA264_18730 - phosphate ABC transporter ATP-binding protein, at 4,348,465 to 4,349,229
_18730
CA264_18735: CA264_18735 - phosphate ABC transporter, permease protein PstA, at 4,349,236 to 4,350,093
_18735
CA264_18740: CA264_18740 - phosphate ABC transporter permease subunit PstC, at 4,350,086 to 4,350,961
_18740
Position (kb)
4348
4349
4350 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4347.538 kb on + strand at 4347.660 kb on + strand at 4347.671 kb on - strand at 4347.674 kb on + strand at 4347.674 kb on + strand at 4347.675 kb on - strand at 4347.676 kb on + strand at 4347.679 kb on + strand at 4347.716 kb on + strand at 4347.782 kb on - strand, within CA264_18725 at 4347.852 kb on + strand, within CA264_18725 at 4347.895 kb on + strand, within CA264_18725 at 4347.895 kb on + strand, within CA264_18725 at 4347.896 kb on - strand, within CA264_18725 at 4348.033 kb on + strand, within CA264_18725 at 4348.033 kb on + strand, within CA264_18725 at 4348.034 kb on - strand, within CA264_18725 at 4348.034 kb on - strand, within CA264_18725 at 4348.067 kb on + strand, within CA264_18725 at 4348.122 kb on - strand, within CA264_18725 at 4348.196 kb on + strand, within CA264_18725 at 4348.244 kb on - strand, within CA264_18725 at 4348.334 kb on - strand at 4348.334 kb on - strand at 4348.380 kb on + strand at 4348.380 kb on + strand at 4348.392 kb on + strand at 4348.392 kb on + strand at 4348.393 kb on - strand at 4348.393 kb on - strand at 4348.405 kb on + strand at 4348.406 kb on - strand at 4348.406 kb on - strand at 4348.435 kb on + strand at 4348.436 kb on - strand at 4348.440 kb on + strand at 4348.482 kb on + strand at 4348.487 kb on + strand at 4348.575 kb on + strand, within CA264_18730 at 4348.631 kb on + strand, within CA264_18730 at 4348.649 kb on + strand, within CA264_18730 at 4348.649 kb on + strand, within CA264_18730 at 4348.649 kb on + strand, within CA264_18730 at 4348.938 kb on + strand, within CA264_18730 at 4349.050 kb on + strand, within CA264_18730 at 4349.050 kb on + strand, within CA264_18730 at 4349.050 kb on + strand, within CA264_18730 at 4349.050 kb on + strand, within CA264_18730 at 4349.152 kb on - strand, within CA264_18730 at 4349.181 kb on - strand at 4349.232 kb on + strand at 4349.233 kb on - strand at 4349.233 kb on - strand at 4349.233 kb on - strand at 4349.269 kb on + strand at 4349.269 kb on + strand at 4349.273 kb on + strand at 4349.275 kb on + strand at 4349.276 kb on - strand at 4349.314 kb on + strand at 4349.315 kb on - strand at 4349.373 kb on + strand, within CA264_18735 at 4349.508 kb on + strand, within CA264_18735 at 4349.579 kb on + strand, within CA264_18735 at 4349.668 kb on - strand, within CA264_18735 at 4349.742 kb on + strand, within CA264_18735 at 4349.743 kb on - strand, within CA264_18735 at 4349.813 kb on + strand, within CA264_18735 at 4349.813 kb on + strand, within CA264_18735 at 4349.814 kb on - strand, within CA264_18735 at 4349.905 kb on + strand, within CA264_18735 at 4349.944 kb on - strand, within CA264_18735 at 4350.022 kb on + strand at 4350.023 kb on - strand at 4350.023 kb on - strand at 4350.023 kb on - strand at 4350.024 kb on + strand at 4350.087 kb on + strand at 4350.094 kb on - strand at 4350.163 kb on + strand at 4350.163 kb on + strand at 4350.164 kb on - strand at 4350.164 kb on - strand at 4350.166 kb on + strand at 4350.167 kb on - strand at 4350.224 kb on + strand, within CA264_18740 at 4350.225 kb on - strand, within CA264_18740
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 4,347,538 + +0.1 4,347,660 + +0.6 4,347,671 - +0.1 4,347,674 + +0.5 4,347,674 + +0.4 4,347,675 - +0.4 4,347,676 + -0.1 4,347,679 + -0.2 4,347,716 + -0.2 4,347,782 - CA264_18725 0.14 +0.1 4,347,852 + CA264_18725 0.24 -0.3 4,347,895 + CA264_18725 0.30 -0.1 4,347,895 + CA264_18725 0.30 +1.2 4,347,896 - CA264_18725 0.30 -0.7 4,348,033 + CA264_18725 0.49 -0.5 4,348,033 + CA264_18725 0.49 -0.3 4,348,034 - CA264_18725 0.49 +1.4 4,348,034 - CA264_18725 0.49 -0.9 4,348,067 + CA264_18725 0.54 +0.3 4,348,122 - CA264_18725 0.61 -0.4 4,348,196 + CA264_18725 0.71 -0.5 4,348,244 - CA264_18725 0.78 +0.9 4,348,334 - -1.1 4,348,334 - -0.9 4,348,380 + -0.4 4,348,380 + -0.4 4,348,392 + +1.5 4,348,392 + +0.1 4,348,393 - +0.1 4,348,393 - -0.7 4,348,405 + -0.4 4,348,406 - -0.3 4,348,406 - -0.3 4,348,435 + +0.4 4,348,436 - -0.2 4,348,440 + -0.6 4,348,482 + -0.2 4,348,487 + -1.2 4,348,575 + CA264_18730 0.14 +0.9 4,348,631 + CA264_18730 0.22 +0.7 4,348,649 + CA264_18730 0.24 +0.6 4,348,649 + CA264_18730 0.24 +0.9 4,348,649 + CA264_18730 0.24 -0.2 4,348,938 + CA264_18730 0.62 -0.4 4,349,050 + CA264_18730 0.76 +0.6 4,349,050 + CA264_18730 0.76 +1.3 4,349,050 + CA264_18730 0.76 -0.7 4,349,050 + CA264_18730 0.76 +2.0 4,349,152 - CA264_18730 0.90 +0.3 4,349,181 - +0.2 4,349,232 + -0.6 4,349,233 - -0.4 4,349,233 - -2.1 4,349,233 - +0.9 4,349,269 + +1.9 4,349,269 + +0.1 4,349,273 + -0.3 4,349,275 + +0.3 4,349,276 - +0.3 4,349,314 + -0.5 4,349,315 - -2.4 4,349,373 + CA264_18735 0.16 +0.1 4,349,508 + CA264_18735 0.32 -0.0 4,349,579 + CA264_18735 0.40 +1.0 4,349,668 - CA264_18735 0.50 -1.1 4,349,742 + CA264_18735 0.59 -0.1 4,349,743 - CA264_18735 0.59 +0.4 4,349,813 + CA264_18735 0.67 -2.1 4,349,813 + CA264_18735 0.67 -0.6 4,349,814 - CA264_18735 0.67 -0.2 4,349,905 + CA264_18735 0.78 +0.5 4,349,944 - CA264_18735 0.83 -0.0 4,350,022 + -0.1 4,350,023 - -0.3 4,350,023 - +0.7 4,350,023 - +0.6 4,350,024 + +0.3 4,350,087 + -0.2 4,350,094 - -0.5 4,350,163 + -0.3 4,350,163 + -0.0 4,350,164 - -0.9 4,350,164 - +0.4 4,350,166 + +0.5 4,350,167 - -0.5 4,350,224 + CA264_18740 0.16 -0.2 4,350,225 - CA264_18740 0.16 -0.4
Or see this region's nucleotide sequence