Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18470 and CA264_18475 are separated by 57 nucleotides CA264_18475 and CA264_18480 are separated by 209 nucleotides
CA264_18470: CA264_18470 - peptidase M28, at 4,295,549 to 4,297,288
_18470
CA264_18475: CA264_18475 - very short patch repair endonuclease, at 4,297,346 to 4,297,747
_18475
CA264_18480: CA264_18480 - hypothetical protein, at 4,297,957 to 4,298,256
_18480
Position (kb)
4297
4298 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4296.638 kb on + strand, within CA264_18470 at 4296.651 kb on + strand, within CA264_18470 at 4296.652 kb on - strand, within CA264_18470 at 4296.652 kb on - strand, within CA264_18470 at 4296.667 kb on - strand, within CA264_18470 at 4296.670 kb on - strand, within CA264_18470 at 4296.670 kb on - strand, within CA264_18470 at 4296.767 kb on - strand, within CA264_18470 at 4296.774 kb on - strand, within CA264_18470 at 4296.830 kb on + strand, within CA264_18470 at 4296.830 kb on + strand, within CA264_18470 at 4296.830 kb on + strand, within CA264_18470 at 4296.830 kb on + strand, within CA264_18470 at 4296.831 kb on - strand, within CA264_18470 at 4296.854 kb on + strand, within CA264_18470 at 4296.855 kb on - strand, within CA264_18470 at 4296.855 kb on - strand, within CA264_18470 at 4296.855 kb on - strand, within CA264_18470 at 4296.895 kb on - strand, within CA264_18470 at 4296.961 kb on + strand, within CA264_18470 at 4296.986 kb on + strand, within CA264_18470 at 4296.987 kb on - strand, within CA264_18470 at 4296.991 kb on - strand, within CA264_18470 at 4296.991 kb on - strand, within CA264_18470 at 4296.991 kb on - strand, within CA264_18470 at 4297.147 kb on + strand at 4297.214 kb on + strand at 4297.215 kb on - strand at 4297.302 kb on - strand at 4297.315 kb on + strand at 4297.356 kb on - strand at 4297.386 kb on - strand at 4297.395 kb on - strand, within CA264_18475 at 4297.395 kb on - strand, within CA264_18475 at 4297.474 kb on - strand, within CA264_18475 at 4297.631 kb on - strand, within CA264_18475 at 4297.652 kb on - strand, within CA264_18475 at 4297.709 kb on + strand at 4297.710 kb on - strand at 4297.796 kb on - strand at 4297.797 kb on + strand at 4297.892 kb on + strand at 4297.894 kb on + strand at 4297.894 kb on + strand at 4297.894 kb on + strand at 4297.894 kb on + strand at 4297.894 kb on + strand at 4297.894 kb on + strand at 4297.895 kb on - strand at 4297.895 kb on - strand at 4297.921 kb on - strand at 4297.940 kb on - strand at 4297.940 kb on - strand at 4297.970 kb on + strand at 4297.970 kb on + strand at 4298.069 kb on + strand, within CA264_18480 at 4298.252 kb on + strand at 4298.252 kb on + strand at 4298.253 kb on - strand at 4298.253 kb on - strand at 4298.253 kb on - strand at 4298.253 kb on - strand at 4298.253 kb on - strand at 4298.253 kb on - strand at 4298.256 kb on + strand at 4298.256 kb on + strand at 4298.256 kb on + strand at 4298.257 kb on - strand at 4298.350 kb on - strand at 4298.359 kb on + strand at 4298.360 kb on - strand at 4298.436 kb on - strand at 4298.456 kb on + strand at 4298.465 kb on - strand at 4298.466 kb on + strand at 4298.467 kb on - strand at 4298.467 kb on - strand at 4298.507 kb on + strand at 4298.508 kb on - strand at 4298.557 kb on + strand at 4298.665 kb on + strand at 4298.666 kb on - strand at 4298.671 kb on - strand at 4298.671 kb on - strand at 4298.716 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 4,296,638 + CA264_18470 0.63 -1.5 4,296,651 + CA264_18470 0.63 -0.0 4,296,652 - CA264_18470 0.63 +0.6 4,296,652 - CA264_18470 0.63 -0.0 4,296,667 - CA264_18470 0.64 -0.6 4,296,670 - CA264_18470 0.64 -0.5 4,296,670 - CA264_18470 0.64 -0.0 4,296,767 - CA264_18470 0.70 -0.4 4,296,774 - CA264_18470 0.70 +0.3 4,296,830 + CA264_18470 0.74 -1.2 4,296,830 + CA264_18470 0.74 -0.3 4,296,830 + CA264_18470 0.74 +0.4 4,296,830 + CA264_18470 0.74 -1.2 4,296,831 - CA264_18470 0.74 +0.1 4,296,854 + CA264_18470 0.75 -0.7 4,296,855 - CA264_18470 0.75 -0.2 4,296,855 - CA264_18470 0.75 -0.0 4,296,855 - CA264_18470 0.75 +0.2 4,296,895 - CA264_18470 0.77 +0.3 4,296,961 + CA264_18470 0.81 -0.0 4,296,986 + CA264_18470 0.83 +0.1 4,296,987 - CA264_18470 0.83 -2.3 4,296,991 - CA264_18470 0.83 +0.5 4,296,991 - CA264_18470 0.83 +0.3 4,296,991 - CA264_18470 0.83 -0.1 4,297,147 + -1.1 4,297,214 + -0.5 4,297,215 - -0.3 4,297,302 - -0.4 4,297,315 + -1.7 4,297,356 - -0.4 4,297,386 - -1.7 4,297,395 - CA264_18475 0.12 -1.3 4,297,395 - CA264_18475 0.12 -0.9 4,297,474 - CA264_18475 0.32 -0.7 4,297,631 - CA264_18475 0.71 +0.1 4,297,652 - CA264_18475 0.76 -0.0 4,297,709 + +0.6 4,297,710 - -0.1 4,297,796 - +0.3 4,297,797 + -1.2 4,297,892 + -1.1 4,297,894 + -1.5 4,297,894 + +0.6 4,297,894 + -1.5 4,297,894 + -0.3 4,297,894 + +0.3 4,297,894 + -1.1 4,297,895 - +0.0 4,297,895 - -1.5 4,297,921 - -0.1 4,297,940 - +0.8 4,297,940 - -1.2 4,297,970 + -1.0 4,297,970 + -0.6 4,298,069 + CA264_18480 0.37 -0.6 4,298,252 + +1.9 4,298,252 + -1.3 4,298,253 - -1.7 4,298,253 - -0.8 4,298,253 - +0.3 4,298,253 - -1.3 4,298,253 - +0.2 4,298,253 - -0.3 4,298,256 + -1.2 4,298,256 + +1.1 4,298,256 + -0.5 4,298,257 - +2.1 4,298,350 - +0.9 4,298,359 + +0.1 4,298,360 - -1.5 4,298,436 - -0.6 4,298,456 + +1.0 4,298,465 - +0.6 4,298,466 + -3.0 4,298,467 - -0.4 4,298,467 - +1.3 4,298,507 + -1.3 4,298,508 - -1.0 4,298,557 + -0.7 4,298,665 + -0.7 4,298,666 - -1.2 4,298,671 - -1.1 4,298,671 - -0.7 4,298,716 + -0.6
Or see this region's nucleotide sequence