Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18125 and CA264_18130 are separated by 126 nucleotides CA264_18130 and CA264_18135 are separated by 30 nucleotides CA264_18135 and CA264_18140 are separated by 90 nucleotides CA264_18140 and CA264_18145 are separated by 278 nucleotides
CA264_18125: CA264_18125 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 4,214,951 to 4,215,997
_18125
CA264_18130: CA264_18130 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 4,216,124 to 4,216,810
_18130
CA264_18135: CA264_18135 - ABC transporter ATP-binding protein, at 4,216,841 to 4,217,566
_18135
CA264_18140: CA264_18140 - hypothetical protein, at 4,217,657 to 4,217,878
_18140
CA264_18145: CA264_18145 - ribonuclease, at 4,218,157 to 4,219,470
_18145
Position (kb)
4216
4217
4218 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4216.002 kb on - strand at 4216.078 kb on + strand at 4216.111 kb on + strand at 4216.768 kb on + strand at 4216.770 kb on + strand at 4216.800 kb on + strand at 4217.052 kb on + strand, within CA264_18135 at 4217.053 kb on - strand, within CA264_18135 at 4217.053 kb on - strand, within CA264_18135 at 4217.055 kb on + strand, within CA264_18135 at 4217.055 kb on + strand, within CA264_18135 at 4217.206 kb on + strand, within CA264_18135 at 4217.206 kb on + strand, within CA264_18135 at 4217.206 kb on + strand, within CA264_18135 at 4217.238 kb on + strand, within CA264_18135 at 4217.238 kb on + strand, within CA264_18135 at 4217.300 kb on - strand, within CA264_18135 at 4217.377 kb on + strand, within CA264_18135 at 4217.378 kb on - strand, within CA264_18135 at 4217.412 kb on - strand, within CA264_18135 at 4217.475 kb on - strand, within CA264_18135 at 4217.580 kb on - strand at 4217.607 kb on + strand at 4217.608 kb on - strand at 4217.636 kb on - strand at 4217.650 kb on - strand at 4217.662 kb on - strand at 4217.893 kb on + strand at 4217.894 kb on - strand at 4218.142 kb on - strand at 4218.146 kb on + strand at 4218.146 kb on + strand at 4218.148 kb on + strand at 4218.148 kb on + strand at 4218.148 kb on + strand at 4218.149 kb on - strand at 4218.277 kb on - strand at 4218.343 kb on - strand, within CA264_18145 at 4218.428 kb on + strand, within CA264_18145 at 4218.429 kb on - strand, within CA264_18145
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 4,216,002 - -2.4 4,216,078 + -0.0 4,216,111 + +0.3 4,216,768 + -1.6 4,216,770 + -0.6 4,216,800 + +0.0 4,217,052 + CA264_18135 0.29 +1.2 4,217,053 - CA264_18135 0.29 +0.6 4,217,053 - CA264_18135 0.29 +1.8 4,217,055 + CA264_18135 0.29 -0.3 4,217,055 + CA264_18135 0.29 +0.2 4,217,206 + CA264_18135 0.50 +0.9 4,217,206 + CA264_18135 0.50 +0.4 4,217,206 + CA264_18135 0.50 +0.7 4,217,238 + CA264_18135 0.55 -0.0 4,217,238 + CA264_18135 0.55 +0.7 4,217,300 - CA264_18135 0.63 +1.2 4,217,377 + CA264_18135 0.74 +0.6 4,217,378 - CA264_18135 0.74 +1.2 4,217,412 - CA264_18135 0.79 +1.4 4,217,475 - CA264_18135 0.87 +2.0 4,217,580 - -1.6 4,217,607 + -0.8 4,217,608 - +0.3 4,217,636 - -0.8 4,217,650 - +0.1 4,217,662 - -1.2 4,217,893 + -0.4 4,217,894 - +0.5 4,218,142 - +0.3 4,218,146 + +0.9 4,218,146 + -1.0 4,218,148 + +0.1 4,218,148 + -1.0 4,218,148 + -0.3 4,218,149 - -0.9 4,218,277 - -0.7 4,218,343 - CA264_18145 0.14 +0.2 4,218,428 + CA264_18145 0.21 -0.2 4,218,429 - CA264_18145 0.21 -0.1
Or see this region's nucleotide sequence