Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17015 and CA264_17020 are separated by 132 nucleotides CA264_17020 and CA264_17025 are separated by 24 nucleotides CA264_17025 and CA264_17030 are separated by 265 nucleotides
CA264_17015: CA264_17015 - ABC transporter permease, at 3,960,120 to 3,961,343
_17015
CA264_17020: CA264_17020 - methyltransferase type 11, at 3,961,476 to 3,962,285
_17020
CA264_17025: CA264_17025 - ribosome-binding factor A, at 3,962,310 to 3,962,705
_17025
CA264_17030: CA264_17030 - hypothetical protein, at 3,962,971 to 3,964,329
_17030
Position (kb)
3961
3962
3963 Strain fitness (log2 ratio)
-1
0
1
2 at 3961.437 kb on - strand at 3961.442 kb on - strand at 3961.450 kb on + strand at 3961.468 kb on + strand at 3961.469 kb on - strand at 3961.473 kb on + strand at 3961.473 kb on + strand at 3961.474 kb on - strand at 3961.474 kb on - strand at 3961.474 kb on - strand at 3961.474 kb on - strand at 3961.474 kb on - strand at 3961.491 kb on + strand at 3961.554 kb on - strand at 3961.574 kb on - strand, within CA264_17020 at 3961.577 kb on - strand, within CA264_17020 at 3961.672 kb on + strand, within CA264_17020 at 3961.698 kb on - strand, within CA264_17020 at 3961.741 kb on + strand, within CA264_17020 at 3961.742 kb on - strand, within CA264_17020 at 3961.890 kb on + strand, within CA264_17020 at 3961.917 kb on + strand, within CA264_17020 at 3961.951 kb on - strand, within CA264_17020 at 3961.981 kb on + strand, within CA264_17020 at 3962.000 kb on + strand, within CA264_17020 at 3962.080 kb on + strand, within CA264_17020 at 3962.081 kb on - strand, within CA264_17020 at 3962.084 kb on - strand, within CA264_17020 at 3962.089 kb on + strand, within CA264_17020 at 3962.090 kb on - strand, within CA264_17020 at 3962.270 kb on + strand at 3962.304 kb on + strand at 3962.312 kb on - strand at 3962.323 kb on + strand at 3962.324 kb on - strand at 3962.724 kb on + strand at 3962.728 kb on - strand at 3962.900 kb on + strand at 3962.900 kb on + strand at 3962.904 kb on + strand at 3962.904 kb on + strand at 3962.904 kb on + strand at 3962.904 kb on + strand at 3962.904 kb on + strand at 3962.905 kb on - strand at 3962.935 kb on - strand at 3962.946 kb on + strand at 3962.951 kb on + strand at 3962.954 kb on + strand at 3962.955 kb on - strand at 3962.955 kb on - strand at 3963.023 kb on + strand at 3963.082 kb on + strand at 3963.103 kb on + strand at 3963.104 kb on - strand at 3963.173 kb on + strand, within CA264_17030 at 3963.174 kb on - strand, within CA264_17030 at 3963.225 kb on - strand, within CA264_17030 at 3963.269 kb on - strand, within CA264_17030
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 3,961,437 - +0.7 3,961,442 - +1.3 3,961,450 + +0.4 3,961,468 + +0.8 3,961,469 - +0.2 3,961,473 + -0.6 3,961,473 + +0.1 3,961,474 - -0.6 3,961,474 - +1.9 3,961,474 - +1.3 3,961,474 - +1.8 3,961,474 - +0.8 3,961,491 + -0.1 3,961,554 - +0.9 3,961,574 - CA264_17020 0.12 +2.3 3,961,577 - CA264_17020 0.12 +0.5 3,961,672 + CA264_17020 0.24 -0.3 3,961,698 - CA264_17020 0.27 +1.2 3,961,741 + CA264_17020 0.33 -0.7 3,961,742 - CA264_17020 0.33 +1.3 3,961,890 + CA264_17020 0.51 +0.1 3,961,917 + CA264_17020 0.54 +1.2 3,961,951 - CA264_17020 0.59 +0.2 3,961,981 + CA264_17020 0.62 -1.5 3,962,000 + CA264_17020 0.65 -0.7 3,962,080 + CA264_17020 0.75 -0.0 3,962,081 - CA264_17020 0.75 +1.2 3,962,084 - CA264_17020 0.75 +0.8 3,962,089 + CA264_17020 0.76 -1.1 3,962,090 - CA264_17020 0.76 +0.7 3,962,270 + -0.8 3,962,304 + -1.1 3,962,312 - -0.7 3,962,323 + -0.5 3,962,324 - +0.4 3,962,724 + -0.1 3,962,728 - +0.3 3,962,900 + -0.9 3,962,900 + +0.9 3,962,904 + +1.0 3,962,904 + +0.4 3,962,904 + +0.4 3,962,904 + +1.0 3,962,904 + +1.0 3,962,905 - +0.9 3,962,935 - -0.1 3,962,946 + +0.6 3,962,951 + -0.3 3,962,954 + +0.3 3,962,955 - +0.8 3,962,955 - +0.6 3,963,023 + +1.0 3,963,082 + -0.2 3,963,103 + +0.5 3,963,104 - +0.4 3,963,173 + CA264_17030 0.15 -0.6 3,963,174 - CA264_17030 0.15 +0.2 3,963,225 - CA264_17030 0.19 -0.7 3,963,269 - CA264_17030 0.22 +0.3
Or see this region's nucleotide sequence