Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17000 and CA264_17005 are separated by 68 nucleotides CA264_17005 and CA264_17010 are separated by 303 nucleotides
CA264_17000: CA264_17000 - phytoene dehydrogenase, at 3,954,694 to 3,956,196
_17000
CA264_17005: CA264_17005 - hypothetical protein, at 3,956,265 to 3,956,705
_17005
CA264_17010: CA264_17010 - helicase SNF2, at 3,957,009 to 3,959,945
_17010
Position (kb)
3956
3957 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3955.412 kb on - strand, within CA264_17000 at 3955.448 kb on - strand, within CA264_17000 at 3955.448 kb on - strand, within CA264_17000 at 3955.448 kb on - strand, within CA264_17000 at 3955.464 kb on - strand, within CA264_17000 at 3955.520 kb on + strand, within CA264_17000 at 3955.520 kb on + strand, within CA264_17000 at 3955.520 kb on + strand, within CA264_17000 at 3955.521 kb on - strand, within CA264_17000 at 3955.616 kb on + strand, within CA264_17000 at 3955.690 kb on - strand, within CA264_17000 at 3955.690 kb on - strand, within CA264_17000 at 3955.898 kb on + strand, within CA264_17000 at 3955.967 kb on + strand, within CA264_17000 at 3955.996 kb on - strand, within CA264_17000 at 3956.202 kb on - strand at 3956.205 kb on - strand at 3956.207 kb on - strand at 3956.215 kb on - strand at 3956.241 kb on - strand at 3956.243 kb on + strand at 3956.266 kb on + strand at 3956.347 kb on - strand, within CA264_17005 at 3956.368 kb on + strand, within CA264_17005 at 3956.372 kb on + strand, within CA264_17005 at 3956.372 kb on + strand, within CA264_17005 at 3956.372 kb on + strand, within CA264_17005 at 3956.373 kb on - strand, within CA264_17005 at 3956.375 kb on + strand, within CA264_17005 at 3956.375 kb on + strand, within CA264_17005 at 3956.375 kb on + strand, within CA264_17005 at 3956.375 kb on + strand, within CA264_17005 at 3956.469 kb on + strand, within CA264_17005 at 3956.476 kb on + strand, within CA264_17005 at 3956.493 kb on + strand, within CA264_17005 at 3956.628 kb on - strand, within CA264_17005 at 3956.683 kb on + strand at 3956.710 kb on + strand at 3956.711 kb on - strand at 3956.711 kb on - strand at 3956.712 kb on + strand at 3956.713 kb on - strand at 3956.748 kb on + strand at 3956.753 kb on + strand at 3956.756 kb on - strand at 3956.805 kb on + strand at 3956.983 kb on + strand at 3957.117 kb on + strand at 3957.118 kb on - strand at 3957.129 kb on + strand at 3957.130 kb on - strand at 3957.155 kb on - strand at 3957.162 kb on + strand at 3957.242 kb on + strand at 3957.242 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 3,955,412 - CA264_17000 0.48 +0.6 3,955,448 - CA264_17000 0.50 -0.0 3,955,448 - CA264_17000 0.50 +0.3 3,955,448 - CA264_17000 0.50 +0.7 3,955,464 - CA264_17000 0.51 -0.2 3,955,520 + CA264_17000 0.55 +1.3 3,955,520 + CA264_17000 0.55 +0.9 3,955,520 + CA264_17000 0.55 -0.9 3,955,521 - CA264_17000 0.55 +0.6 3,955,616 + CA264_17000 0.61 -0.1 3,955,690 - CA264_17000 0.66 +0.8 3,955,690 - CA264_17000 0.66 +0.2 3,955,898 + CA264_17000 0.80 -0.1 3,955,967 + CA264_17000 0.85 +0.0 3,955,996 - CA264_17000 0.87 +1.1 3,956,202 - +0.4 3,956,205 - -1.6 3,956,207 - -0.0 3,956,215 - +0.2 3,956,241 - +0.4 3,956,243 + +1.6 3,956,266 + +1.1 3,956,347 - CA264_17005 0.19 +2.2 3,956,368 + CA264_17005 0.23 -1.1 3,956,372 + CA264_17005 0.24 +0.1 3,956,372 + CA264_17005 0.24 +1.3 3,956,372 + CA264_17005 0.24 +0.6 3,956,373 - CA264_17005 0.24 +1.2 3,956,375 + CA264_17005 0.25 +0.5 3,956,375 + CA264_17005 0.25 +0.5 3,956,375 + CA264_17005 0.25 +0.5 3,956,375 + CA264_17005 0.25 +0.2 3,956,469 + CA264_17005 0.46 +0.7 3,956,476 + CA264_17005 0.48 +0.2 3,956,493 + CA264_17005 0.52 +0.2 3,956,628 - CA264_17005 0.82 +1.4 3,956,683 + +0.1 3,956,710 + +0.6 3,956,711 - +1.0 3,956,711 - -0.7 3,956,712 + +0.2 3,956,713 - +0.8 3,956,748 + -0.5 3,956,753 + +0.1 3,956,756 - +1.8 3,956,805 + +0.4 3,956,983 + -1.5 3,957,117 + +0.5 3,957,118 - -2.4 3,957,129 + -0.1 3,957,130 - -1.4 3,957,155 - -3.2 3,957,162 + -1.7 3,957,242 + -1.3 3,957,242 + -1.3
Or see this region's nucleotide sequence