Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15345

Experiment: m.b. D-Cycloserine 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_15340 and CA264_15345 are separated by 880 nucleotidesCA264_15345 and CA264_15350 are separated by 9 nucleotidesCA264_15350 and CA264_15355 are separated by 181 nucleotides CA264_15340: CA264_15340 - hypothetical protein, at 3,593,160 to 3,593,351 _15340 CA264_15345: CA264_15345 - ferrous iron transporter B, at 3,594,232 to 3,596,385 _15345 CA264_15350: CA264_15350 - ferrous iron transport protein A, at 3,596,395 to 3,596,646 _15350 CA264_15355: CA264_15355 - bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase, at 3,596,828 to 3,599,284 _15355 Position (kb) 3594 3595 3596 3597Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3593.232 kb on - strand, within CA264_15340at 3593.240 kb on - strand, within CA264_15340at 3593.301 kb on - strand, within CA264_15340at 3593.301 kb on - strand, within CA264_15340at 3593.304 kb on + strand, within CA264_15340at 3593.333 kb on - strandat 3593.390 kb on + strandat 3593.394 kb on + strandat 3593.434 kb on + strandat 3593.445 kb on + strandat 3593.461 kb on + strandat 3593.475 kb on + strandat 3593.483 kb on + strandat 3593.495 kb on + strandat 3593.497 kb on + strandat 3593.559 kb on + strandat 3593.645 kb on - strandat 3593.652 kb on - strandat 3593.737 kb on + strandat 3593.737 kb on + strandat 3593.737 kb on + strandat 3593.738 kb on - strandat 3593.902 kb on + strandat 3593.902 kb on + strandat 3593.902 kb on + strandat 3593.902 kb on + strandat 3593.933 kb on + strandat 3593.991 kb on + strandat 3593.992 kb on - strandat 3594.023 kb on - strandat 3594.023 kb on - strandat 3594.047 kb on - strandat 3594.075 kb on + strandat 3594.075 kb on + strandat 3594.075 kb on + strandat 3594.145 kb on + strandat 3594.145 kb on + strandat 3594.198 kb on + strandat 3594.199 kb on - strandat 3594.224 kb on - strandat 3594.237 kb on + strandat 3596.377 kb on + strandat 3596.651 kb on + strandat 3596.661 kb on + strandat 3596.984 kb on + strandat 3596.996 kb on - strandat 3596.996 kb on - strandat 3597.329 kb on - strand, within CA264_15355

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml
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3,593,232 - CA264_15340 0.38 -0.3
3,593,240 - CA264_15340 0.42 -0.3
3,593,301 - CA264_15340 0.73 +0.1
3,593,301 - CA264_15340 0.73 +0.0
3,593,304 + CA264_15340 0.75 -1.4
3,593,333 - -0.9
3,593,390 + +0.0
3,593,394 + +0.3
3,593,434 + -0.2
3,593,445 + +0.7
3,593,461 + +0.5
3,593,475 + +0.3
3,593,483 + +0.5
3,593,495 + -0.5
3,593,497 + +0.4
3,593,559 + +1.1
3,593,645 - +0.4
3,593,652 - -0.2
3,593,737 + +0.8
3,593,737 + -0.4
3,593,737 + +0.5
3,593,738 - -0.1
3,593,902 + +0.3
3,593,902 + +0.5
3,593,902 + +1.1
3,593,902 + +1.1
3,593,933 + +1.1
3,593,991 + +0.3
3,593,992 - +0.3
3,594,023 - +0.5
3,594,023 - +0.3
3,594,047 - -1.5
3,594,075 + +3.1
3,594,075 + +0.6
3,594,075 + +0.6
3,594,145 + +0.6
3,594,145 + +0.7
3,594,198 + -2.0
3,594,199 - -0.3
3,594,224 - -0.2
3,594,237 + +0.5
3,596,377 + -0.4
3,596,651 + +2.0
3,596,661 + +1.4
3,596,984 + -0.4
3,596,996 - -0.9
3,596,996 - -3.8
3,597,329 - CA264_15355 0.20 -3.7

Or see this region's nucleotide sequence