Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14600 and CA264_14605 are separated by 15 nucleotides CA264_14605 and CA264_14610 are separated by 4 nucleotides
CA264_14600: CA264_14600 - serine hydrolase, at 3,432,455 to 3,433,606
_14600
CA264_14605: CA264_14605 - hypothetical protein, at 3,433,622 to 3,436,825
_14605
CA264_14610: CA264_14610 - FAD-dependent oxidoreductase, at 3,436,830 to 3,437,918
_14610
Position (kb)
3433
3434
3435
3436
3437 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3432.657 kb on + strand, within CA264_14600 at 3432.723 kb on + strand, within CA264_14600 at 3432.724 kb on - strand, within CA264_14600 at 3432.771 kb on + strand, within CA264_14600 at 3432.773 kb on + strand, within CA264_14600 at 3432.773 kb on + strand, within CA264_14600 at 3432.836 kb on - strand, within CA264_14600 at 3432.909 kb on + strand, within CA264_14600 at 3433.047 kb on + strand, within CA264_14600 at 3433.084 kb on - strand, within CA264_14600 at 3433.136 kb on + strand, within CA264_14600 at 3433.136 kb on + strand, within CA264_14600 at 3433.137 kb on - strand, within CA264_14600 at 3433.376 kb on + strand, within CA264_14600 at 3433.395 kb on - strand, within CA264_14600 at 3433.405 kb on - strand, within CA264_14600 at 3433.467 kb on - strand, within CA264_14600 at 3433.483 kb on + strand, within CA264_14600 at 3433.512 kb on + strand at 3433.518 kb on + strand at 3433.519 kb on - strand at 3433.519 kb on - strand at 3433.542 kb on + strand at 3433.647 kb on + strand at 3433.648 kb on - strand at 3433.655 kb on - strand at 3433.662 kb on - strand at 3433.744 kb on - strand at 3433.768 kb on - strand at 3433.772 kb on - strand at 3433.775 kb on + strand at 3433.776 kb on - strand at 3433.783 kb on + strand at 3433.846 kb on + strand at 3433.875 kb on + strand at 3433.876 kb on - strand at 3433.937 kb on - strand at 3433.953 kb on + strand, within CA264_14605 at 3433.953 kb on + strand, within CA264_14605 at 3433.953 kb on + strand, within CA264_14605 at 3433.954 kb on - strand, within CA264_14605 at 3433.954 kb on - strand, within CA264_14605 at 3433.958 kb on + strand, within CA264_14605 at 3433.958 kb on + strand, within CA264_14605 at 3434.131 kb on + strand, within CA264_14605 at 3434.132 kb on - strand, within CA264_14605 at 3434.189 kb on + strand, within CA264_14605 at 3434.189 kb on + strand, within CA264_14605 at 3434.190 kb on - strand, within CA264_14605 at 3434.190 kb on - strand, within CA264_14605 at 3434.204 kb on + strand, within CA264_14605 at 3434.230 kb on - strand, within CA264_14605 at 3434.230 kb on - strand, within CA264_14605 at 3434.230 kb on - strand, within CA264_14605 at 3434.280 kb on - strand, within CA264_14605 at 3434.358 kb on + strand, within CA264_14605 at 3434.424 kb on + strand, within CA264_14605 at 3434.462 kb on + strand, within CA264_14605 at 3434.617 kb on - strand, within CA264_14605 at 3434.717 kb on + strand, within CA264_14605 at 3434.720 kb on - strand, within CA264_14605 at 3434.720 kb on - strand, within CA264_14605 at 3434.720 kb on - strand, within CA264_14605 at 3434.720 kb on - strand, within CA264_14605 at 3434.756 kb on - strand, within CA264_14605 at 3434.756 kb on - strand, within CA264_14605 at 3434.801 kb on + strand, within CA264_14605 at 3434.899 kb on - strand, within CA264_14605 at 3434.970 kb on - strand, within CA264_14605 at 3435.023 kb on + strand, within CA264_14605 at 3435.024 kb on - strand, within CA264_14605 at 3435.026 kb on - strand, within CA264_14605 at 3435.087 kb on + strand, within CA264_14605 at 3435.116 kb on + strand, within CA264_14605 at 3435.119 kb on + strand, within CA264_14605 at 3435.120 kb on - strand, within CA264_14605 at 3435.147 kb on + strand, within CA264_14605 at 3435.147 kb on + strand, within CA264_14605 at 3435.148 kb on - strand, within CA264_14605 at 3435.153 kb on + strand, within CA264_14605 at 3435.214 kb on - strand, within CA264_14605 at 3435.252 kb on + strand, within CA264_14605 at 3435.253 kb on - strand, within CA264_14605 at 3435.253 kb on - strand, within CA264_14605 at 3435.288 kb on - strand, within CA264_14605 at 3435.364 kb on - strand, within CA264_14605 at 3435.364 kb on - strand, within CA264_14605 at 3435.364 kb on - strand, within CA264_14605 at 3435.372 kb on - strand, within CA264_14605 at 3435.372 kb on - strand, within CA264_14605 at 3435.382 kb on + strand, within CA264_14605 at 3435.463 kb on - strand, within CA264_14605 at 3435.474 kb on - strand, within CA264_14605 at 3435.485 kb on + strand, within CA264_14605 at 3435.486 kb on - strand, within CA264_14605 at 3435.486 kb on - strand, within CA264_14605 at 3435.488 kb on - strand, within CA264_14605 at 3435.497 kb on - strand, within CA264_14605 at 3435.595 kb on - strand, within CA264_14605 at 3435.608 kb on + strand, within CA264_14605 at 3435.609 kb on - strand, within CA264_14605 at 3435.676 kb on - strand, within CA264_14605 at 3435.777 kb on + strand, within CA264_14605 at 3435.888 kb on + strand, within CA264_14605 at 3436.010 kb on + strand, within CA264_14605 at 3436.020 kb on + strand, within CA264_14605 at 3436.021 kb on - strand, within CA264_14605 at 3436.023 kb on + strand, within CA264_14605 at 3436.029 kb on + strand, within CA264_14605 at 3436.076 kb on - strand, within CA264_14605 at 3436.143 kb on + strand, within CA264_14605 at 3436.144 kb on - strand, within CA264_14605 at 3436.158 kb on + strand, within CA264_14605 at 3436.159 kb on - strand, within CA264_14605 at 3436.159 kb on - strand, within CA264_14605 at 3436.180 kb on + strand, within CA264_14605 at 3436.181 kb on - strand, within CA264_14605 at 3436.251 kb on + strand, within CA264_14605 at 3436.252 kb on - strand, within CA264_14605 at 3436.288 kb on - strand, within CA264_14605 at 3436.307 kb on - strand, within CA264_14605 at 3436.332 kb on + strand, within CA264_14605 at 3436.333 kb on - strand, within CA264_14605 at 3436.369 kb on - strand, within CA264_14605 at 3436.460 kb on - strand, within CA264_14605 at 3436.495 kb on - strand, within CA264_14605 at 3436.573 kb on - strand at 3436.578 kb on + strand at 3436.579 kb on - strand at 3436.668 kb on + strand at 3436.668 kb on + strand at 3436.670 kb on + strand at 3436.671 kb on - strand at 3436.671 kb on - strand at 3436.671 kb on - strand at 3436.693 kb on - strand at 3436.714 kb on + strand at 3436.716 kb on + strand at 3436.722 kb on - strand at 3436.815 kb on + strand at 3436.864 kb on + strand at 3436.865 kb on - strand at 3436.868 kb on - strand at 3436.868 kb on - strand at 3436.869 kb on + strand at 3436.876 kb on - strand at 3436.879 kb on + strand at 3436.951 kb on + strand, within CA264_14610 at 3436.973 kb on + strand, within CA264_14610 at 3437.076 kb on + strand, within CA264_14610 at 3437.099 kb on + strand, within CA264_14610 at 3437.099 kb on + strand, within CA264_14610 at 3437.100 kb on - strand, within CA264_14610 at 3437.100 kb on - strand, within CA264_14610 at 3437.174 kb on - strand, within CA264_14610 at 3437.174 kb on - strand, within CA264_14610 at 3437.174 kb on - strand, within CA264_14610 at 3437.229 kb on - strand, within CA264_14610 at 3437.233 kb on + strand, within CA264_14610 at 3437.233 kb on + strand, within CA264_14610 at 3437.234 kb on - strand, within CA264_14610 at 3437.234 kb on - strand, within CA264_14610 at 3437.377 kb on + strand, within CA264_14610 at 3437.377 kb on + strand, within CA264_14610 at 3437.553 kb on - strand, within CA264_14610 at 3437.579 kb on - strand, within CA264_14610 at 3437.579 kb on - strand, within CA264_14610 at 3437.644 kb on - strand, within CA264_14610 at 3437.644 kb on - strand, within CA264_14610 at 3437.650 kb on + strand, within CA264_14610
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 3,432,657 + CA264_14600 0.18 +0.6 3,432,723 + CA264_14600 0.23 +0.7 3,432,724 - CA264_14600 0.23 -1.5 3,432,771 + CA264_14600 0.27 +0.7 3,432,773 + CA264_14600 0.28 +1.6 3,432,773 + CA264_14600 0.28 +0.4 3,432,836 - CA264_14600 0.33 -0.7 3,432,909 + CA264_14600 0.39 +0.3 3,433,047 + CA264_14600 0.51 -0.7 3,433,084 - CA264_14600 0.55 -0.2 3,433,136 + CA264_14600 0.59 +0.0 3,433,136 + CA264_14600 0.59 -0.4 3,433,137 - CA264_14600 0.59 +0.2 3,433,376 + CA264_14600 0.80 +0.8 3,433,395 - CA264_14600 0.82 -0.0 3,433,405 - CA264_14600 0.82 +0.5 3,433,467 - CA264_14600 0.88 -2.3 3,433,483 + CA264_14600 0.89 +1.1 3,433,512 + +0.6 3,433,518 + +1.8 3,433,519 - -0.5 3,433,519 - -0.1 3,433,542 + +0.2 3,433,647 + -0.0 3,433,648 - +0.0 3,433,655 - +0.5 3,433,662 - +0.6 3,433,744 - +0.1 3,433,768 - +0.9 3,433,772 - -0.7 3,433,775 + -1.0 3,433,776 - -0.4 3,433,783 + +0.1 3,433,846 + -0.9 3,433,875 + -0.7 3,433,876 - -0.6 3,433,937 - +0.2 3,433,953 + CA264_14605 0.10 +0.8 3,433,953 + CA264_14605 0.10 -0.6 3,433,953 + CA264_14605 0.10 -0.7 3,433,954 - CA264_14605 0.10 +0.8 3,433,954 - CA264_14605 0.10 -0.6 3,433,958 + CA264_14605 0.10 -0.1 3,433,958 + CA264_14605 0.10 -1.0 3,434,131 + CA264_14605 0.16 +0.7 3,434,132 - CA264_14605 0.16 -0.7 3,434,189 + CA264_14605 0.18 -0.2 3,434,189 + CA264_14605 0.18 +0.7 3,434,190 - CA264_14605 0.18 -0.2 3,434,190 - CA264_14605 0.18 -0.7 3,434,204 + CA264_14605 0.18 -0.8 3,434,230 - CA264_14605 0.19 -0.7 3,434,230 - CA264_14605 0.19 -1.3 3,434,230 - CA264_14605 0.19 +0.8 3,434,280 - CA264_14605 0.21 +0.4 3,434,358 + CA264_14605 0.23 -0.1 3,434,424 + CA264_14605 0.25 -0.5 3,434,462 + CA264_14605 0.26 +0.1 3,434,617 - CA264_14605 0.31 +1.3 3,434,717 + CA264_14605 0.34 +0.8 3,434,720 - CA264_14605 0.34 +1.0 3,434,720 - CA264_14605 0.34 +0.0 3,434,720 - CA264_14605 0.34 -0.9 3,434,720 - CA264_14605 0.34 -0.5 3,434,756 - CA264_14605 0.35 -0.6 3,434,756 - CA264_14605 0.35 -1.4 3,434,801 + CA264_14605 0.37 +0.1 3,434,899 - CA264_14605 0.40 -1.6 3,434,970 - CA264_14605 0.42 +0.4 3,435,023 + CA264_14605 0.44 -0.5 3,435,024 - CA264_14605 0.44 -0.4 3,435,026 - CA264_14605 0.44 +0.3 3,435,087 + CA264_14605 0.46 -0.2 3,435,116 + CA264_14605 0.47 -0.6 3,435,119 + CA264_14605 0.47 -0.4 3,435,120 - CA264_14605 0.47 -0.2 3,435,147 + CA264_14605 0.48 -0.6 3,435,147 + CA264_14605 0.48 -0.6 3,435,148 - CA264_14605 0.48 -0.3 3,435,153 + CA264_14605 0.48 -0.4 3,435,214 - CA264_14605 0.50 +0.1 3,435,252 + CA264_14605 0.51 -0.8 3,435,253 - CA264_14605 0.51 +0.2 3,435,253 - CA264_14605 0.51 -0.1 3,435,288 - CA264_14605 0.52 -0.7 3,435,364 - CA264_14605 0.54 -0.3 3,435,364 - CA264_14605 0.54 -1.0 3,435,364 - CA264_14605 0.54 -1.0 3,435,372 - CA264_14605 0.55 +0.0 3,435,372 - CA264_14605 0.55 -0.7 3,435,382 + CA264_14605 0.55 -0.1 3,435,463 - CA264_14605 0.57 -0.4 3,435,474 - CA264_14605 0.58 -0.2 3,435,485 + CA264_14605 0.58 +0.2 3,435,486 - CA264_14605 0.58 -0.4 3,435,486 - CA264_14605 0.58 +0.9 3,435,488 - CA264_14605 0.58 +0.2 3,435,497 - CA264_14605 0.59 -0.8 3,435,595 - CA264_14605 0.62 +0.4 3,435,608 + CA264_14605 0.62 -0.6 3,435,609 - CA264_14605 0.62 -1.3 3,435,676 - CA264_14605 0.64 -1.2 3,435,777 + CA264_14605 0.67 +0.3 3,435,888 + CA264_14605 0.71 -0.7 3,436,010 + CA264_14605 0.75 -0.8 3,436,020 + CA264_14605 0.75 -0.4 3,436,021 - CA264_14605 0.75 -0.9 3,436,023 + CA264_14605 0.75 -0.5 3,436,029 + CA264_14605 0.75 -1.4 3,436,076 - CA264_14605 0.77 -0.5 3,436,143 + CA264_14605 0.79 +0.1 3,436,144 - CA264_14605 0.79 +1.1 3,436,158 + CA264_14605 0.79 -0.9 3,436,159 - CA264_14605 0.79 +1.0 3,436,159 - CA264_14605 0.79 -0.9 3,436,180 + CA264_14605 0.80 -0.7 3,436,181 - CA264_14605 0.80 +0.2 3,436,251 + CA264_14605 0.82 -0.6 3,436,252 - CA264_14605 0.82 +2.7 3,436,288 - CA264_14605 0.83 -0.2 3,436,307 - CA264_14605 0.84 +0.2 3,436,332 + CA264_14605 0.85 -1.2 3,436,333 - CA264_14605 0.85 -0.4 3,436,369 - CA264_14605 0.86 -0.2 3,436,460 - CA264_14605 0.89 +0.2 3,436,495 - CA264_14605 0.90 +0.6 3,436,573 - -0.2 3,436,578 + -1.5 3,436,579 - +0.1 3,436,668 + -0.2 3,436,668 + -1.5 3,436,670 + -0.8 3,436,671 - -2.1 3,436,671 - -0.2 3,436,671 - +0.4 3,436,693 - +0.0 3,436,714 + -0.6 3,436,716 + +2.0 3,436,722 - +0.4 3,436,815 + -1.9 3,436,864 + -1.6 3,436,865 - +0.2 3,436,868 - -1.1 3,436,868 - +0.8 3,436,869 + -0.9 3,436,876 - +0.1 3,436,879 + +1.2 3,436,951 + CA264_14610 0.11 -1.0 3,436,973 + CA264_14610 0.13 -0.1 3,437,076 + CA264_14610 0.23 -1.3 3,437,099 + CA264_14610 0.25 +1.3 3,437,099 + CA264_14610 0.25 -0.9 3,437,100 - CA264_14610 0.25 -1.7 3,437,100 - CA264_14610 0.25 -0.2 3,437,174 - CA264_14610 0.32 +0.2 3,437,174 - CA264_14610 0.32 -0.6 3,437,174 - CA264_14610 0.32 -2.0 3,437,229 - CA264_14610 0.37 +0.1 3,437,233 + CA264_14610 0.37 -1.3 3,437,233 + CA264_14610 0.37 -0.3 3,437,234 - CA264_14610 0.37 -1.0 3,437,234 - CA264_14610 0.37 +0.4 3,437,377 + CA264_14610 0.50 -0.9 3,437,377 + CA264_14610 0.50 -1.2 3,437,553 - CA264_14610 0.66 -0.3 3,437,579 - CA264_14610 0.69 +0.3 3,437,579 - CA264_14610 0.69 -1.9 3,437,644 - CA264_14610 0.75 -0.1 3,437,644 - CA264_14610 0.75 -0.7 3,437,650 + CA264_14610 0.75 -0.1
Or see this region's nucleotide sequence