Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14465 and CA264_14470 are separated by 584 nucleotides CA264_14470 and CA264_14475 are separated by 92 nucleotides
CA264_14465: CA264_14465 - translation initiation factor IF-2, at 3,393,501 to 3,396,584
_14465
CA264_14470: CA264_14470 - hypothetical protein, at 3,397,169 to 3,397,504
_14470
CA264_14475: CA264_14475 - hypothetical protein, at 3,397,597 to 3,398,550
_14475
Position (kb)
3397
3398 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3396.575 kb on + strand at 3396.648 kb on + strand at 3396.659 kb on + strand at 3396.697 kb on + strand at 3396.727 kb on + strand at 3396.727 kb on + strand at 3396.728 kb on - strand at 3396.729 kb on + strand at 3396.729 kb on + strand at 3396.730 kb on - strand at 3396.730 kb on - strand at 3396.730 kb on - strand at 3396.730 kb on - strand at 3396.733 kb on + strand at 3396.733 kb on + strand at 3396.734 kb on - strand at 3396.780 kb on - strand at 3396.791 kb on - strand at 3396.850 kb on - strand at 3396.879 kb on + strand at 3396.951 kb on + strand at 3397.005 kb on + strand at 3397.090 kb on - strand at 3397.090 kb on - strand at 3397.146 kb on + strand at 3397.147 kb on - strand at 3397.148 kb on + strand at 3397.149 kb on - strand at 3397.149 kb on - strand at 3397.149 kb on - strand at 3397.152 kb on + strand at 3397.153 kb on - strand at 3397.154 kb on + strand at 3397.155 kb on - strand at 3397.160 kb on + strand at 3397.210 kb on + strand, within CA264_14470 at 3397.210 kb on + strand, within CA264_14470 at 3397.211 kb on - strand, within CA264_14470 at 3397.311 kb on + strand, within CA264_14470 at 3397.315 kb on + strand, within CA264_14470 at 3397.316 kb on - strand, within CA264_14470 at 3397.320 kb on + strand, within CA264_14470 at 3397.320 kb on + strand, within CA264_14470 at 3397.353 kb on - strand, within CA264_14470 at 3397.401 kb on + strand, within CA264_14470 at 3397.414 kb on + strand, within CA264_14470 at 3397.415 kb on - strand, within CA264_14470 at 3397.524 kb on + strand at 3397.527 kb on + strand at 3397.529 kb on + strand at 3397.792 kb on + strand, within CA264_14475 at 3397.885 kb on + strand, within CA264_14475 at 3397.932 kb on + strand, within CA264_14475 at 3398.005 kb on + strand, within CA264_14475 at 3398.013 kb on + strand, within CA264_14475 at 3398.014 kb on - strand, within CA264_14475 at 3398.038 kb on - strand, within CA264_14475 at 3398.067 kb on - strand, within CA264_14475 at 3398.186 kb on + strand, within CA264_14475 at 3398.236 kb on - strand, within CA264_14475 at 3398.283 kb on - strand, within CA264_14475 at 3398.286 kb on + strand, within CA264_14475 at 3398.287 kb on - strand, within CA264_14475 at 3398.402 kb on - strand, within CA264_14475
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 3,396,575 + -1.4 3,396,648 + +1.0 3,396,659 + +0.1 3,396,697 + -0.1 3,396,727 + -1.1 3,396,727 + +0.0 3,396,728 - -0.6 3,396,729 + +0.3 3,396,729 + +0.4 3,396,730 - -0.8 3,396,730 - -0.3 3,396,730 - +0.3 3,396,730 - -1.0 3,396,733 + -1.0 3,396,733 + +1.0 3,396,734 - -0.2 3,396,780 - -0.2 3,396,791 - -0.3 3,396,850 - -0.4 3,396,879 + -1.0 3,396,951 + -0.1 3,397,005 + -1.9 3,397,090 - +0.1 3,397,090 - +0.8 3,397,146 + +0.5 3,397,147 - -0.1 3,397,148 + +0.8 3,397,149 - -0.7 3,397,149 - +0.0 3,397,149 - -0.4 3,397,152 + -1.4 3,397,153 - -0.7 3,397,154 + +0.4 3,397,155 - -0.1 3,397,160 + +0.4 3,397,210 + CA264_14470 0.12 +0.1 3,397,210 + CA264_14470 0.12 -0.2 3,397,211 - CA264_14470 0.12 +1.3 3,397,311 + CA264_14470 0.42 +1.3 3,397,315 + CA264_14470 0.43 +0.9 3,397,316 - CA264_14470 0.44 -0.5 3,397,320 + CA264_14470 0.45 +0.3 3,397,320 + CA264_14470 0.45 +0.5 3,397,353 - CA264_14470 0.55 +0.1 3,397,401 + CA264_14470 0.69 -0.7 3,397,414 + CA264_14470 0.73 +1.3 3,397,415 - CA264_14470 0.73 -0.0 3,397,524 + +0.9 3,397,527 + +0.2 3,397,529 + +0.1 3,397,792 + CA264_14475 0.20 +0.9 3,397,885 + CA264_14475 0.30 +0.2 3,397,932 + CA264_14475 0.35 +0.0 3,398,005 + CA264_14475 0.43 +0.2 3,398,013 + CA264_14475 0.44 +0.9 3,398,014 - CA264_14475 0.44 -0.8 3,398,038 - CA264_14475 0.46 +0.7 3,398,067 - CA264_14475 0.49 +0.5 3,398,186 + CA264_14475 0.62 +1.1 3,398,236 - CA264_14475 0.67 +1.8 3,398,283 - CA264_14475 0.72 +1.1 3,398,286 + CA264_14475 0.72 +1.1 3,398,287 - CA264_14475 0.72 +1.0 3,398,402 - CA264_14475 0.84 +0.9
Or see this region's nucleotide sequence