Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13195 and CA264_13200 are separated by 268 nucleotides CA264_13200 and CA264_13205 are separated by 74 nucleotides CA264_13205 and CA264_13210 are separated by 255 nucleotides
CA264_13195: CA264_13195 - hypothetical protein, at 3,077,142 to 3,078,170
_13195
CA264_13200: CA264_13200 - lysine--tRNA ligase, at 3,078,439 to 3,079,983
_13200
CA264_13205: CA264_13205 - hypothetical protein, at 3,080,058 to 3,080,507
_13205
CA264_13210: CA264_13210 - hypothetical protein, at 3,080,763 to 3,081,101
_13210
Position (kb)
3078
3079
3080 Strain fitness (log2 ratio)
-2
-1
0
1 at 3077.472 kb on + strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.475 kb on + strand, within CA264_13195 at 3077.476 kb on - strand, within CA264_13195 at 3077.583 kb on + strand, within CA264_13195 at 3077.584 kb on - strand, within CA264_13195 at 3077.620 kb on - strand, within CA264_13195 at 3077.658 kb on + strand, within CA264_13195 at 3077.659 kb on - strand, within CA264_13195 at 3077.816 kb on - strand, within CA264_13195 at 3077.868 kb on - strand, within CA264_13195 at 3077.871 kb on - strand, within CA264_13195 at 3077.939 kb on - strand, within CA264_13195 at 3077.958 kb on - strand, within CA264_13195 at 3077.995 kb on - strand, within CA264_13195 at 3078.018 kb on + strand, within CA264_13195 at 3078.019 kb on - strand, within CA264_13195 at 3078.103 kb on + strand at 3078.103 kb on + strand at 3078.123 kb on - strand at 3078.169 kb on - strand at 3078.253 kb on + strand at 3078.253 kb on + strand at 3078.270 kb on - strand at 3078.274 kb on + strand at 3078.386 kb on + strand at 3078.410 kb on - strand at 3078.447 kb on - strand at 3080.059 kb on + strand at 3080.084 kb on + strand at 3080.084 kb on + strand at 3080.084 kb on + strand at 3080.085 kb on - strand at 3080.100 kb on - strand at 3080.227 kb on - strand, within CA264_13205 at 3080.276 kb on + strand, within CA264_13205 at 3080.364 kb on + strand, within CA264_13205 at 3080.382 kb on + strand, within CA264_13205 at 3080.422 kb on + strand, within CA264_13205 at 3080.423 kb on - strand, within CA264_13205 at 3080.443 kb on - strand, within CA264_13205 at 3080.508 kb on - strand at 3080.519 kb on + strand at 3080.540 kb on - strand at 3080.587 kb on - strand at 3080.587 kb on - strand at 3080.607 kb on - strand at 3080.798 kb on + strand, within CA264_13210 at 3080.799 kb on - strand, within CA264_13210 at 3080.964 kb on - strand, within CA264_13210 at 3080.973 kb on - strand, within CA264_13210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 3,077,472 + CA264_13195 0.32 +0.4 3,077,473 - CA264_13195 0.32 +0.5 3,077,473 - CA264_13195 0.32 -0.1 3,077,473 - CA264_13195 0.32 -0.2 3,077,475 + CA264_13195 0.32 +0.3 3,077,476 - CA264_13195 0.32 -0.3 3,077,583 + CA264_13195 0.43 +0.4 3,077,584 - CA264_13195 0.43 +0.8 3,077,620 - CA264_13195 0.46 -0.3 3,077,658 + CA264_13195 0.50 +0.6 3,077,659 - CA264_13195 0.50 -0.1 3,077,816 - CA264_13195 0.66 -0.1 3,077,868 - CA264_13195 0.71 +1.2 3,077,871 - CA264_13195 0.71 +0.9 3,077,939 - CA264_13195 0.77 -0.1 3,077,958 - CA264_13195 0.79 -0.1 3,077,995 - CA264_13195 0.83 +0.5 3,078,018 + CA264_13195 0.85 +0.3 3,078,019 - CA264_13195 0.85 +0.1 3,078,103 + +0.1 3,078,103 + -0.8 3,078,123 - -0.3 3,078,169 - -0.0 3,078,253 + -0.1 3,078,253 + -0.4 3,078,270 - -0.6 3,078,274 + +1.0 3,078,386 + +0.2 3,078,410 - -0.1 3,078,447 - -0.9 3,080,059 + -0.5 3,080,084 + -0.2 3,080,084 + -1.6 3,080,084 + +0.8 3,080,085 - +0.9 3,080,100 - +0.4 3,080,227 - CA264_13205 0.38 -0.3 3,080,276 + CA264_13205 0.48 -2.3 3,080,364 + CA264_13205 0.68 +0.6 3,080,382 + CA264_13205 0.72 -0.2 3,080,422 + CA264_13205 0.81 -0.8 3,080,423 - CA264_13205 0.81 +0.5 3,080,443 - CA264_13205 0.86 -0.0 3,080,508 - +1.4 3,080,519 + -1.8 3,080,540 - -0.1 3,080,587 - -0.4 3,080,587 - -0.0 3,080,607 - -0.2 3,080,798 + CA264_13210 0.10 +0.3 3,080,799 - CA264_13210 0.11 +1.5 3,080,964 - CA264_13210 0.59 -0.6 3,080,973 - CA264_13210 0.62 +0.1
Or see this region's nucleotide sequence