Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12210 and CA264_12215 are separated by 264 nucleotides CA264_12215 and CA264_12220 are separated by 163 nucleotides CA264_12220 and CA264_12225 are separated by 117 nucleotides
CA264_12210: CA264_12210 - hypothetical protein, at 2,844,931 to 2,846,238
_12210
CA264_12215: CA264_12215 - cupin, at 2,846,503 to 2,847,021
_12215
CA264_12220: CA264_12220 - NAD-dependent dehydratase, at 2,847,185 to 2,847,811
_12220
CA264_12225: CA264_12225 - carboxypeptidase, at 2,847,929 to 2,849,416
_12225
Position (kb)
2846
2847
2848 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2845.572 kb on - strand, within CA264_12210 at 2845.572 kb on - strand, within CA264_12210 at 2845.781 kb on - strand, within CA264_12210 at 2846.079 kb on - strand, within CA264_12210 at 2846.079 kb on - strand, within CA264_12210 at 2846.103 kb on - strand, within CA264_12210 at 2846.133 kb on - strand at 2846.133 kb on - strand at 2846.190 kb on + strand at 2846.190 kb on + strand at 2846.221 kb on + strand at 2846.221 kb on + strand at 2846.222 kb on - strand at 2846.222 kb on - strand at 2846.222 kb on - strand at 2846.222 kb on - strand at 2846.238 kb on + strand at 2846.241 kb on + strand at 2846.241 kb on + strand at 2846.241 kb on + strand at 2846.242 kb on - strand at 2846.245 kb on + strand at 2846.246 kb on - strand at 2846.254 kb on - strand at 2846.254 kb on - strand at 2846.255 kb on + strand at 2846.255 kb on + strand at 2846.255 kb on + strand at 2846.255 kb on + strand at 2846.259 kb on + strand at 2846.260 kb on - strand at 2846.317 kb on + strand at 2846.318 kb on - strand at 2846.318 kb on - strand at 2846.345 kb on + strand at 2846.358 kb on + strand at 2846.359 kb on - strand at 2846.359 kb on - strand at 2846.359 kb on - strand at 2846.362 kb on + strand at 2846.363 kb on - strand at 2846.402 kb on + strand at 2846.430 kb on + strand at 2846.430 kb on + strand at 2846.431 kb on - strand at 2846.434 kb on + strand at 2846.435 kb on - strand at 2846.435 kb on - strand at 2846.435 kb on - strand at 2846.452 kb on + strand at 2846.462 kb on - strand at 2846.474 kb on + strand at 2846.478 kb on - strand at 2846.494 kb on + strand at 2846.502 kb on + strand at 2846.514 kb on + strand at 2846.515 kb on - strand at 2846.516 kb on + strand at 2846.520 kb on + strand at 2846.520 kb on + strand at 2846.521 kb on - strand at 2846.588 kb on - strand, within CA264_12215 at 2846.628 kb on - strand, within CA264_12215 at 2846.652 kb on + strand, within CA264_12215 at 2846.652 kb on + strand, within CA264_12215 at 2846.652 kb on + strand, within CA264_12215 at 2846.652 kb on + strand, within CA264_12215 at 2846.653 kb on - strand, within CA264_12215 at 2846.653 kb on - strand, within CA264_12215 at 2846.951 kb on + strand, within CA264_12215 at 2846.952 kb on - strand, within CA264_12215 at 2847.053 kb on - strand at 2847.061 kb on + strand at 2847.093 kb on + strand at 2847.178 kb on + strand at 2847.179 kb on - strand at 2847.193 kb on - strand at 2847.193 kb on - strand at 2847.234 kb on + strand at 2847.235 kb on - strand at 2847.269 kb on + strand, within CA264_12220 at 2847.269 kb on + strand, within CA264_12220 at 2847.270 kb on - strand, within CA264_12220 at 2847.420 kb on + strand, within CA264_12220 at 2847.535 kb on - strand, within CA264_12220 at 2847.535 kb on - strand, within CA264_12220 at 2847.542 kb on + strand, within CA264_12220 at 2847.591 kb on + strand, within CA264_12220 at 2847.622 kb on - strand, within CA264_12220 at 2847.690 kb on + strand, within CA264_12220 at 2847.690 kb on + strand, within CA264_12220 at 2847.691 kb on - strand, within CA264_12220 at 2847.691 kb on - strand, within CA264_12220 at 2847.705 kb on + strand, within CA264_12220 at 2847.820 kb on + strand at 2847.821 kb on - strand at 2847.821 kb on - strand at 2847.851 kb on + strand at 2847.851 kb on + strand at 2847.852 kb on - strand at 2847.852 kb on - strand at 2847.852 kb on - strand at 2847.904 kb on - strand at 2847.909 kb on - strand at 2847.927 kb on + strand at 2847.928 kb on - strand at 2847.930 kb on + strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.931 kb on - strand at 2847.933 kb on + strand at 2847.934 kb on - strand at 2847.934 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,845,572 - CA264_12210 0.49 +0.4 2,845,572 - CA264_12210 0.49 +1.7 2,845,781 - CA264_12210 0.65 +0.7 2,846,079 - CA264_12210 0.88 +0.6 2,846,079 - CA264_12210 0.88 +1.0 2,846,103 - CA264_12210 0.90 +0.1 2,846,133 - +0.1 2,846,133 - +0.9 2,846,190 + -0.3 2,846,190 + -0.2 2,846,221 + +0.4 2,846,221 + +1.5 2,846,222 - +1.0 2,846,222 - -1.4 2,846,222 - -0.3 2,846,222 - -0.1 2,846,238 + -0.0 2,846,241 + +0.4 2,846,241 + +0.4 2,846,241 + -0.3 2,846,242 - +0.7 2,846,245 + -0.6 2,846,246 - -0.3 2,846,254 - +0.5 2,846,254 - +0.1 2,846,255 + +0.6 2,846,255 + +0.7 2,846,255 + +0.7 2,846,255 + +1.0 2,846,259 + +2.4 2,846,260 - +1.3 2,846,317 + -0.0 2,846,318 - +1.0 2,846,318 - +1.7 2,846,345 + +0.8 2,846,358 + +0.5 2,846,359 - +2.6 2,846,359 - +1.9 2,846,359 - +1.2 2,846,362 + -0.5 2,846,363 - +0.5 2,846,402 + +1.1 2,846,430 + +1.3 2,846,430 + +0.6 2,846,431 - +1.1 2,846,434 + +0.4 2,846,435 - +2.4 2,846,435 - +0.4 2,846,435 - +0.9 2,846,452 + +0.6 2,846,462 - -0.1 2,846,474 + +1.1 2,846,478 - +0.2 2,846,494 + -1.0 2,846,502 + +0.5 2,846,514 + +0.6 2,846,515 - +1.6 2,846,516 + +0.2 2,846,520 + -1.1 2,846,520 + -0.2 2,846,521 - +0.6 2,846,588 - CA264_12215 0.16 +1.1 2,846,628 - CA264_12215 0.24 +0.7 2,846,652 + CA264_12215 0.29 -0.4 2,846,652 + CA264_12215 0.29 +0.6 2,846,652 + CA264_12215 0.29 +0.4 2,846,652 + CA264_12215 0.29 +0.0 2,846,653 - CA264_12215 0.29 +1.3 2,846,653 - CA264_12215 0.29 +0.3 2,846,951 + CA264_12215 0.86 -0.4 2,846,952 - CA264_12215 0.87 +1.1 2,847,053 - +0.4 2,847,061 + +0.1 2,847,093 + -1.3 2,847,178 + +0.3 2,847,179 - +1.0 2,847,193 - +0.1 2,847,193 - +1.7 2,847,234 + +1.3 2,847,235 - +0.7 2,847,269 + CA264_12220 0.13 +0.6 2,847,269 + CA264_12220 0.13 +0.7 2,847,270 - CA264_12220 0.14 +1.9 2,847,420 + CA264_12220 0.37 +0.2 2,847,535 - CA264_12220 0.56 +0.8 2,847,535 - CA264_12220 0.56 -0.8 2,847,542 + CA264_12220 0.57 -0.9 2,847,591 + CA264_12220 0.65 +0.3 2,847,622 - CA264_12220 0.70 -0.1 2,847,690 + CA264_12220 0.81 -1.1 2,847,690 + CA264_12220 0.81 -0.4 2,847,691 - CA264_12220 0.81 +0.7 2,847,691 - CA264_12220 0.81 -0.3 2,847,705 + CA264_12220 0.83 +0.3 2,847,820 + +0.1 2,847,821 - -1.7 2,847,821 - +0.7 2,847,851 + +0.4 2,847,851 + +0.5 2,847,852 - -0.1 2,847,852 - +2.2 2,847,852 - +1.2 2,847,904 - -0.2 2,847,909 - +0.2 2,847,927 + -0.3 2,847,928 - -2.2 2,847,930 + -1.1 2,847,931 - +0.3 2,847,931 - -0.3 2,847,931 - -0.1 2,847,933 + -0.8 2,847,934 - +0.2 2,847,934 - -1.9
Or see this region's nucleotide sequence