Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11800 and CA264_11805 are separated by 194 nucleotides CA264_11805 and CA264_11810 are separated by 204 nucleotides CA264_11810 and CA264_11815 are separated by 103 nucleotides CA264_11815 and CA264_11820 are separated by 126 nucleotides
CA264_11800: CA264_11800 - aerotolerance protein, at 2,747,220 to 2,748,176
_11800
CA264_11805: CA264_11805 - thioesterase, at 2,748,371 to 2,748,886
_11805
CA264_11810: CA264_11810 - HAD family hydrolase, at 2,749,091 to 2,749,729
_11810
CA264_11815: CA264_11815 - hypothetical protein, at 2,749,833 to 2,750,219
_11815
CA264_11820: CA264_11820 - thioesterase, at 2,750,346 to 2,750,792
_11820
Position (kb)
2749
2750 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2748.114 kb on + strand at 2748.114 kb on + strand at 2748.114 kb on + strand at 2748.174 kb on + strand at 2748.258 kb on - strand at 2748.313 kb on - strand at 2748.364 kb on + strand at 2748.364 kb on + strand at 2748.365 kb on - strand at 2748.365 kb on - strand at 2748.473 kb on + strand, within CA264_11805 at 2748.521 kb on + strand, within CA264_11805 at 2748.533 kb on - strand, within CA264_11805 at 2748.534 kb on + strand, within CA264_11805 at 2748.534 kb on + strand, within CA264_11805 at 2748.535 kb on - strand, within CA264_11805 at 2748.536 kb on + strand, within CA264_11805 at 2748.536 kb on + strand, within CA264_11805 at 2748.537 kb on - strand, within CA264_11805 at 2748.537 kb on - strand, within CA264_11805 at 2748.537 kb on - strand, within CA264_11805 at 2748.612 kb on - strand, within CA264_11805 at 2748.624 kb on + strand, within CA264_11805 at 2748.720 kb on + strand, within CA264_11805 at 2748.720 kb on + strand, within CA264_11805 at 2748.720 kb on + strand, within CA264_11805 at 2748.720 kb on + strand, within CA264_11805 at 2748.721 kb on - strand, within CA264_11805 at 2748.721 kb on - strand, within CA264_11805 at 2748.738 kb on - strand, within CA264_11805 at 2748.835 kb on - strand at 2748.835 kb on - strand at 2748.885 kb on - strand at 2748.919 kb on + strand at 2748.920 kb on - strand at 2749.036 kb on - strand at 2749.056 kb on + strand at 2749.056 kb on + strand at 2749.057 kb on - strand at 2749.057 kb on - strand at 2749.059 kb on - strand at 2749.090 kb on + strand at 2749.149 kb on - strand at 2749.149 kb on - strand at 2749.195 kb on - strand, within CA264_11810 at 2749.439 kb on + strand, within CA264_11810 at 2749.465 kb on + strand, within CA264_11810 at 2749.470 kb on + strand, within CA264_11810 at 2749.471 kb on - strand, within CA264_11810 at 2749.515 kb on + strand, within CA264_11810 at 2749.624 kb on + strand, within CA264_11810 at 2749.745 kb on + strand at 2749.745 kb on + strand at 2749.746 kb on - strand at 2749.794 kb on + strand at 2749.795 kb on - strand at 2749.838 kb on - strand at 2749.858 kb on - strand at 2749.872 kb on + strand, within CA264_11815 at 2749.872 kb on + strand, within CA264_11815 at 2749.872 kb on + strand, within CA264_11815 at 2749.875 kb on - strand, within CA264_11815 at 2749.911 kb on + strand, within CA264_11815 at 2749.912 kb on - strand, within CA264_11815 at 2749.926 kb on + strand, within CA264_11815 at 2749.927 kb on - strand, within CA264_11815 at 2749.977 kb on + strand, within CA264_11815 at 2750.013 kb on + strand, within CA264_11815 at 2750.014 kb on - strand, within CA264_11815 at 2750.023 kb on - strand, within CA264_11815 at 2750.086 kb on + strand, within CA264_11815 at 2750.129 kb on - strand, within CA264_11815 at 2750.129 kb on - strand, within CA264_11815 at 2750.145 kb on - strand, within CA264_11815 at 2750.297 kb on + strand at 2750.297 kb on + strand at 2750.298 kb on - strand at 2750.329 kb on + strand at 2750.330 kb on - strand at 2750.331 kb on + strand at 2750.331 kb on + strand at 2750.335 kb on + strand at 2750.335 kb on + strand at 2750.335 kb on + strand at 2750.336 kb on - strand at 2750.337 kb on + strand at 2750.338 kb on - strand at 2750.479 kb on - strand, within CA264_11820 at 2750.500 kb on + strand, within CA264_11820 at 2750.501 kb on - strand, within CA264_11820 at 2750.542 kb on - strand, within CA264_11820 at 2750.577 kb on - strand, within CA264_11820 at 2750.582 kb on + strand, within CA264_11820 at 2750.618 kb on - strand, within CA264_11820
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,748,114 + -1.1 2,748,114 + -0.9 2,748,114 + -2.0 2,748,174 + +0.9 2,748,258 - -0.3 2,748,313 - +0.5 2,748,364 + +0.1 2,748,364 + -0.2 2,748,365 - +0.5 2,748,365 - -0.6 2,748,473 + CA264_11805 0.20 -0.4 2,748,521 + CA264_11805 0.29 -2.2 2,748,533 - CA264_11805 0.31 -0.3 2,748,534 + CA264_11805 0.32 -0.7 2,748,534 + CA264_11805 0.32 -1.5 2,748,535 - CA264_11805 0.32 -0.6 2,748,536 + CA264_11805 0.32 +0.2 2,748,536 + CA264_11805 0.32 -2.6 2,748,537 - CA264_11805 0.32 -0.0 2,748,537 - CA264_11805 0.32 -0.4 2,748,537 - CA264_11805 0.32 +0.2 2,748,612 - CA264_11805 0.47 +0.8 2,748,624 + CA264_11805 0.49 +0.3 2,748,720 + CA264_11805 0.68 -0.2 2,748,720 + CA264_11805 0.68 +0.2 2,748,720 + CA264_11805 0.68 -0.6 2,748,720 + CA264_11805 0.68 -0.2 2,748,721 - CA264_11805 0.68 -0.0 2,748,721 - CA264_11805 0.68 +2.6 2,748,738 - CA264_11805 0.71 +1.0 2,748,835 - -1.8 2,748,835 - -0.7 2,748,885 - -0.7 2,748,919 + -0.6 2,748,920 - -1.4 2,749,036 - +1.9 2,749,056 + +1.5 2,749,056 + -0.4 2,749,057 - +0.5 2,749,057 - +0.4 2,749,059 - -1.3 2,749,090 + -2.7 2,749,149 - +0.3 2,749,149 - +0.2 2,749,195 - CA264_11810 0.16 -0.1 2,749,439 + CA264_11810 0.54 -1.2 2,749,465 + CA264_11810 0.59 -0.1 2,749,470 + CA264_11810 0.59 +0.5 2,749,471 - CA264_11810 0.59 -0.6 2,749,515 + CA264_11810 0.66 -1.6 2,749,624 + CA264_11810 0.83 -1.1 2,749,745 + -0.6 2,749,745 + -0.2 2,749,746 - +0.5 2,749,794 + +1.3 2,749,795 - -0.0 2,749,838 - +1.2 2,749,858 - -1.3 2,749,872 + CA264_11815 0.10 -0.5 2,749,872 + CA264_11815 0.10 +0.6 2,749,872 + CA264_11815 0.10 -0.6 2,749,875 - CA264_11815 0.11 +0.3 2,749,911 + CA264_11815 0.20 -1.5 2,749,912 - CA264_11815 0.20 -1.3 2,749,926 + CA264_11815 0.24 -0.4 2,749,927 - CA264_11815 0.24 +0.4 2,749,977 + CA264_11815 0.37 -1.5 2,750,013 + CA264_11815 0.47 -0.9 2,750,014 - CA264_11815 0.47 +1.4 2,750,023 - CA264_11815 0.49 -0.2 2,750,086 + CA264_11815 0.65 -0.1 2,750,129 - CA264_11815 0.76 +0.1 2,750,129 - CA264_11815 0.76 +0.7 2,750,145 - CA264_11815 0.81 -0.5 2,750,297 + +0.3 2,750,297 + +0.4 2,750,298 - +0.1 2,750,329 + -0.1 2,750,330 - -0.0 2,750,331 + -0.6 2,750,331 + -0.3 2,750,335 + -0.2 2,750,335 + +1.6 2,750,335 + -0.3 2,750,336 - +0.0 2,750,337 + +0.2 2,750,338 - -0.9 2,750,479 - CA264_11820 0.30 -0.4 2,750,500 + CA264_11820 0.34 -0.4 2,750,501 - CA264_11820 0.35 -0.6 2,750,542 - CA264_11820 0.44 -0.5 2,750,577 - CA264_11820 0.52 +0.2 2,750,582 + CA264_11820 0.53 -0.8 2,750,618 - CA264_11820 0.61 +0.5
Or see this region's nucleotide sequence