Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10275 and CA264_10280 are separated by 332 nucleotides CA264_10280 and CA264_10285 are separated by 93 nucleotides CA264_10285 and CA264_10290 are separated by 66 nucleotides
CA264_10275: CA264_10275 - transcriptional regulator, at 2,388,694 to 2,389,089
_10275
CA264_10280: CA264_10280 - hypothetical protein, at 2,389,422 to 2,389,739
_10280
CA264_10285: CA264_10285 - hypothetical protein, at 2,389,833 to 2,390,153
_10285
CA264_10290: CA264_10290 - hypothetical protein, at 2,390,220 to 2,391,650
_10290
Position (kb)
2389
2390
2391 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2388.850 kb on - strand, within CA264_10275 at 2388.940 kb on + strand, within CA264_10275 at 2389.096 kb on - strand at 2389.140 kb on - strand at 2389.152 kb on + strand at 2389.152 kb on + strand at 2389.153 kb on - strand at 2389.183 kb on + strand at 2389.184 kb on - strand at 2389.185 kb on + strand at 2389.185 kb on + strand at 2389.186 kb on - strand at 2389.211 kb on + strand at 2389.212 kb on - strand at 2389.219 kb on + strand at 2389.220 kb on - strand at 2389.274 kb on - strand at 2389.345 kb on + strand at 2389.442 kb on + strand at 2389.495 kb on - strand, within CA264_10280 at 2389.495 kb on - strand, within CA264_10280 at 2389.715 kb on - strand at 2389.718 kb on - strand at 2389.718 kb on - strand at 2389.748 kb on + strand at 2389.749 kb on - strand at 2389.780 kb on + strand at 2389.780 kb on + strand at 2389.781 kb on - strand at 2389.781 kb on - strand at 2389.812 kb on - strand at 2389.812 kb on - strand at 2389.847 kb on + strand at 2389.848 kb on - strand at 2389.953 kb on + strand, within CA264_10285 at 2390.039 kb on + strand, within CA264_10285 at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.219 kb on + strand at 2390.220 kb on - strand at 2390.220 kb on - strand at 2390.220 kb on - strand at 2390.277 kb on + strand at 2390.529 kb on + strand, within CA264_10290 at 2390.529 kb on + strand, within CA264_10290 at 2390.530 kb on - strand, within CA264_10290 at 2390.614 kb on + strand, within CA264_10290 at 2390.643 kb on - strand, within CA264_10290 at 2390.700 kb on + strand, within CA264_10290 at 2391.057 kb on + strand, within CA264_10290 at 2391.057 kb on + strand, within CA264_10290
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,388,850 - CA264_10275 0.39 +0.1 2,388,940 + CA264_10275 0.62 +0.3 2,389,096 - -0.7 2,389,140 - +0.0 2,389,152 + +0.5 2,389,152 + -0.4 2,389,153 - -0.8 2,389,183 + -0.1 2,389,184 - +0.9 2,389,185 + -0.1 2,389,185 + +0.3 2,389,186 - +0.1 2,389,211 + +0.7 2,389,212 - -0.1 2,389,219 + +3.2 2,389,220 - -0.9 2,389,274 - -0.7 2,389,345 + -0.5 2,389,442 + -0.4 2,389,495 - CA264_10280 0.23 -0.8 2,389,495 - CA264_10280 0.23 +1.2 2,389,715 - -0.9 2,389,718 - +0.1 2,389,718 - -0.3 2,389,748 + +0.4 2,389,749 - -0.6 2,389,780 + +0.3 2,389,780 + -0.2 2,389,781 - +1.0 2,389,781 - -0.1 2,389,812 - +0.0 2,389,812 - +0.0 2,389,847 + -1.2 2,389,848 - -0.3 2,389,953 + CA264_10285 0.37 +0.5 2,390,039 + CA264_10285 0.64 +0.6 2,390,219 + +0.4 2,390,219 + -1.5 2,390,219 + -0.2 2,390,219 + +0.4 2,390,219 + +0.0 2,390,220 - -0.0 2,390,220 - +0.1 2,390,220 - +0.8 2,390,277 + +1.4 2,390,529 + CA264_10290 0.22 -1.0 2,390,529 + CA264_10290 0.22 -0.2 2,390,530 - CA264_10290 0.22 +1.6 2,390,614 + CA264_10290 0.28 +1.2 2,390,643 - CA264_10290 0.30 -1.0 2,390,700 + CA264_10290 0.34 +0.1 2,391,057 + CA264_10290 0.58 -0.7 2,391,057 + CA264_10290 0.58 -0.0
Or see this region's nucleotide sequence