Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09790 and CA264_09795 are separated by 0 nucleotides
CA264_09790: CA264_09790 - sensor histidine kinase, at 2,272,638 to 2,273,735
_09790
CA264_09795: CA264_09795 - hypothetical protein, at 2,273,736 to 2,276,834
_09795
Position (kb)
2272
2273
2274 Strain fitness (log2 ratio)
-2
-1
0
1 at 2271.735 kb on - strand at 2271.735 kb on - strand at 2271.788 kb on + strand at 2271.788 kb on + strand at 2271.789 kb on - strand at 2271.904 kb on + strand at 2271.905 kb on - strand at 2271.946 kb on + strand at 2271.946 kb on + strand at 2271.949 kb on - strand at 2271.949 kb on - strand at 2272.019 kb on + strand at 2272.019 kb on + strand at 2272.020 kb on - strand at 2272.126 kb on + strand at 2272.132 kb on + strand at 2272.133 kb on - strand at 2272.171 kb on - strand at 2272.284 kb on + strand at 2272.285 kb on - strand at 2272.380 kb on + strand at 2272.465 kb on - strand at 2272.503 kb on + strand at 2272.504 kb on - strand at 2272.513 kb on + strand at 2272.545 kb on + strand at 2272.598 kb on + strand at 2272.598 kb on + strand at 2272.598 kb on + strand at 2272.598 kb on + strand at 2272.674 kb on - strand at 2272.695 kb on + strand at 2272.714 kb on + strand at 2272.715 kb on - strand at 2272.775 kb on + strand, within CA264_09790 at 2272.844 kb on + strand, within CA264_09790 at 2272.889 kb on + strand, within CA264_09790 at 2272.935 kb on + strand, within CA264_09790 at 2272.936 kb on - strand, within CA264_09790 at 2272.996 kb on - strand, within CA264_09790 at 2272.996 kb on - strand, within CA264_09790 at 2273.012 kb on + strand, within CA264_09790 at 2273.012 kb on + strand, within CA264_09790 at 2273.013 kb on - strand, within CA264_09790 at 2273.013 kb on - strand, within CA264_09790 at 2273.015 kb on - strand, within CA264_09790 at 2273.015 kb on - strand, within CA264_09790 at 2273.071 kb on + strand, within CA264_09790 at 2273.091 kb on - strand, within CA264_09790 at 2273.104 kb on - strand, within CA264_09790 at 2273.130 kb on - strand, within CA264_09790 at 2273.185 kb on - strand, within CA264_09790 at 2273.197 kb on - strand, within CA264_09790 at 2273.197 kb on - strand, within CA264_09790 at 2273.205 kb on + strand, within CA264_09790 at 2273.372 kb on + strand, within CA264_09790 at 2273.373 kb on - strand, within CA264_09790 at 2273.374 kb on + strand, within CA264_09790 at 2273.382 kb on - strand, within CA264_09790 at 2273.491 kb on - strand, within CA264_09790 at 2273.491 kb on - strand, within CA264_09790 at 2273.494 kb on - strand, within CA264_09790 at 2273.538 kb on + strand, within CA264_09790 at 2273.538 kb on + strand, within CA264_09790 at 2273.538 kb on + strand, within CA264_09790 at 2273.543 kb on + strand, within CA264_09790 at 2273.543 kb on + strand, within CA264_09790 at 2273.544 kb on - strand, within CA264_09790 at 2273.544 kb on - strand, within CA264_09790 at 2273.544 kb on - strand, within CA264_09790 at 2273.544 kb on - strand, within CA264_09790 at 2273.604 kb on + strand, within CA264_09790 at 2273.605 kb on - strand, within CA264_09790 at 2273.704 kb on + strand at 2273.727 kb on + strand at 2273.727 kb on + strand at 2273.744 kb on + strand at 2273.757 kb on - strand at 2273.782 kb on + strand at 2273.865 kb on - strand at 2273.865 kb on - strand at 2273.865 kb on - strand at 2273.865 kb on - strand at 2273.866 kb on + strand at 2273.866 kb on + strand at 2273.866 kb on + strand at 2273.867 kb on - strand at 2273.867 kb on - strand at 2273.867 kb on - strand at 2273.919 kb on + strand at 2273.920 kb on - strand at 2273.929 kb on - strand at 2274.060 kb on + strand, within CA264_09795 at 2274.286 kb on + strand, within CA264_09795 at 2274.286 kb on + strand, within CA264_09795 at 2274.287 kb on - strand, within CA264_09795 at 2274.327 kb on - strand, within CA264_09795 at 2274.349 kb on - strand, within CA264_09795 at 2274.415 kb on + strand, within CA264_09795 at 2274.415 kb on + strand, within CA264_09795 at 2274.416 kb on - strand, within CA264_09795 at 2274.431 kb on - strand, within CA264_09795 at 2274.455 kb on + strand, within CA264_09795 at 2274.456 kb on - strand at 2274.476 kb on + strand, within CA264_09795 at 2274.545 kb on + strand, within CA264_09795 at 2274.547 kb on + strand, within CA264_09795 at 2274.675 kb on - strand, within CA264_09795 at 2274.728 kb on + strand, within CA264_09795 at 2274.729 kb on - strand, within CA264_09795
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,271,735 - +0.2 2,271,735 - -1.0 2,271,788 + +0.4 2,271,788 + -0.8 2,271,789 - -1.3 2,271,904 + -2.4 2,271,905 - +0.0 2,271,946 + -0.6 2,271,946 + +0.4 2,271,949 - -0.0 2,271,949 - -0.4 2,272,019 + -0.1 2,272,019 + -0.1 2,272,020 - -0.8 2,272,126 + +0.6 2,272,132 + -0.4 2,272,133 - -0.6 2,272,171 - +1.1 2,272,284 + +0.5 2,272,285 - +0.5 2,272,380 + +1.1 2,272,465 - -0.7 2,272,503 + +0.1 2,272,504 - +0.7 2,272,513 + -0.7 2,272,545 + -1.1 2,272,598 + +0.1 2,272,598 + +0.0 2,272,598 + +0.9 2,272,598 + -0.2 2,272,674 - -0.3 2,272,695 + -0.6 2,272,714 + +0.2 2,272,715 - +0.9 2,272,775 + CA264_09790 0.12 -0.4 2,272,844 + CA264_09790 0.19 +1.6 2,272,889 + CA264_09790 0.23 +0.2 2,272,935 + CA264_09790 0.27 -0.6 2,272,936 - CA264_09790 0.27 +0.1 2,272,996 - CA264_09790 0.33 +0.2 2,272,996 - CA264_09790 0.33 +0.5 2,273,012 + CA264_09790 0.34 +0.5 2,273,012 + CA264_09790 0.34 +0.8 2,273,013 - CA264_09790 0.34 -0.8 2,273,013 - CA264_09790 0.34 -0.2 2,273,015 - CA264_09790 0.34 -0.1 2,273,015 - CA264_09790 0.34 -0.5 2,273,071 + CA264_09790 0.39 -0.4 2,273,091 - CA264_09790 0.41 +0.1 2,273,104 - CA264_09790 0.42 +0.3 2,273,130 - CA264_09790 0.45 -1.6 2,273,185 - CA264_09790 0.50 +0.2 2,273,197 - CA264_09790 0.51 +0.7 2,273,197 - CA264_09790 0.51 +0.1 2,273,205 + CA264_09790 0.52 +1.3 2,273,372 + CA264_09790 0.67 +0.2 2,273,373 - CA264_09790 0.67 +1.0 2,273,374 + CA264_09790 0.67 +0.1 2,273,382 - CA264_09790 0.68 -0.1 2,273,491 - CA264_09790 0.78 -1.0 2,273,491 - CA264_09790 0.78 -0.6 2,273,494 - CA264_09790 0.78 +0.1 2,273,538 + CA264_09790 0.82 +0.0 2,273,538 + CA264_09790 0.82 -0.2 2,273,538 + CA264_09790 0.82 +0.3 2,273,543 + CA264_09790 0.82 +0.4 2,273,543 + CA264_09790 0.82 +0.1 2,273,544 - CA264_09790 0.83 +0.6 2,273,544 - CA264_09790 0.83 +0.4 2,273,544 - CA264_09790 0.83 +1.4 2,273,544 - CA264_09790 0.83 -0.8 2,273,604 + CA264_09790 0.88 +1.4 2,273,605 - CA264_09790 0.88 -1.3 2,273,704 + -0.6 2,273,727 + +0.1 2,273,727 + +0.6 2,273,744 + -0.3 2,273,757 - +1.0 2,273,782 + -0.1 2,273,865 - +0.8 2,273,865 - +0.0 2,273,865 - +1.5 2,273,865 - -2.1 2,273,866 + -1.0 2,273,866 + +0.1 2,273,866 + -0.3 2,273,867 - +0.6 2,273,867 - +0.6 2,273,867 - +0.5 2,273,919 + -1.3 2,273,920 - +0.0 2,273,929 - -1.0 2,274,060 + CA264_09795 0.10 +1.5 2,274,286 + CA264_09795 0.18 -0.1 2,274,286 + CA264_09795 0.18 +0.3 2,274,287 - CA264_09795 0.18 -0.2 2,274,327 - CA264_09795 0.19 +0.1 2,274,349 - CA264_09795 0.20 -0.3 2,274,415 + CA264_09795 0.22 -1.2 2,274,415 + CA264_09795 0.22 -2.7 2,274,416 - CA264_09795 0.22 +0.2 2,274,431 - CA264_09795 0.22 -1.0 2,274,455 + CA264_09795 0.23 +0.9 2,274,456 - +1.6 2,274,476 + CA264_09795 0.24 -0.1 2,274,545 + CA264_09795 0.26 +0.6 2,274,547 + CA264_09795 0.26 -0.3 2,274,675 - CA264_09795 0.30 +0.5 2,274,728 + CA264_09795 0.32 +0.6 2,274,729 - CA264_09795 0.32 +0.0
Or see this region's nucleotide sequence