Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08935 and CA264_08940 are separated by 163 nucleotides CA264_08940 and CA264_08945 are separated by 187 nucleotides
CA264_08935: CA264_08935 - nuclease PIN, at 2,087,171 to 2,088,022
_08935
CA264_08940: CA264_08940 - cysteine synthase B, at 2,088,186 to 2,089,070
_08940
CA264_08945: CA264_08945 - type 1 glutamine amidotransferase domain-containing protein, at 2,089,258 to 2,089,938
_08945
Position (kb)
2088
2089
2090 Strain fitness (log2 ratio)
-2
-1
0
1 at 2087.305 kb on - strand, within CA264_08935 at 2087.305 kb on - strand, within CA264_08935 at 2087.324 kb on + strand, within CA264_08935 at 2087.325 kb on - strand, within CA264_08935 at 2087.415 kb on + strand, within CA264_08935 at 2087.453 kb on - strand, within CA264_08935 at 2087.614 kb on - strand, within CA264_08935 at 2087.617 kb on + strand, within CA264_08935 at 2087.618 kb on - strand, within CA264_08935 at 2087.632 kb on + strand, within CA264_08935 at 2087.635 kb on - strand, within CA264_08935 at 2087.650 kb on + strand, within CA264_08935 at 2087.650 kb on + strand, within CA264_08935 at 2087.693 kb on - strand, within CA264_08935 at 2087.693 kb on - strand, within CA264_08935 at 2087.800 kb on + strand, within CA264_08935 at 2087.801 kb on - strand, within CA264_08935 at 2087.801 kb on - strand, within CA264_08935 at 2087.801 kb on - strand, within CA264_08935 at 2087.887 kb on - strand, within CA264_08935 at 2087.930 kb on - strand, within CA264_08935 at 2087.932 kb on - strand, within CA264_08935 at 2087.932 kb on - strand, within CA264_08935 at 2088.023 kb on - strand at 2088.023 kb on - strand at 2088.076 kb on + strand at 2088.076 kb on + strand at 2088.077 kb on - strand at 2088.096 kb on + strand at 2088.096 kb on + strand at 2088.098 kb on + strand at 2088.102 kb on + strand at 2088.102 kb on + strand at 2088.375 kb on + strand, within CA264_08940 at 2088.376 kb on - strand, within CA264_08940 at 2088.667 kb on + strand, within CA264_08940 at 2088.698 kb on - strand, within CA264_08940 at 2088.702 kb on + strand, within CA264_08940 at 2088.897 kb on + strand, within CA264_08940 at 2088.934 kb on + strand, within CA264_08940 at 2089.014 kb on + strand at 2089.059 kb on + strand at 2089.060 kb on - strand at 2089.088 kb on + strand at 2089.089 kb on - strand at 2089.098 kb on - strand at 2089.120 kb on + strand at 2089.345 kb on + strand, within CA264_08945 at 2089.377 kb on - strand, within CA264_08945 at 2089.380 kb on + strand, within CA264_08945 at 2089.381 kb on - strand, within CA264_08945 at 2089.381 kb on - strand, within CA264_08945 at 2089.554 kb on + strand, within CA264_08945 at 2089.594 kb on - strand, within CA264_08945 at 2089.844 kb on + strand, within CA264_08945 at 2089.844 kb on + strand, within CA264_08945 at 2089.847 kb on + strand, within CA264_08945 at 2089.848 kb on - strand, within CA264_08945 at 2089.948 kb on + strand at 2089.949 kb on - strand at 2089.949 kb on - strand at 2089.953 kb on + strand at 2089.959 kb on + strand at 2089.960 kb on - strand at 2090.050 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,087,305 - CA264_08935 0.16 -0.1 2,087,305 - CA264_08935 0.16 -0.2 2,087,324 + CA264_08935 0.18 -0.5 2,087,325 - CA264_08935 0.18 -1.4 2,087,415 + CA264_08935 0.29 +0.1 2,087,453 - CA264_08935 0.33 -1.7 2,087,614 - CA264_08935 0.52 -0.6 2,087,617 + CA264_08935 0.52 +1.2 2,087,618 - CA264_08935 0.52 -1.7 2,087,632 + CA264_08935 0.54 +0.4 2,087,635 - CA264_08935 0.54 -1.2 2,087,650 + CA264_08935 0.56 +0.5 2,087,650 + CA264_08935 0.56 -0.7 2,087,693 - CA264_08935 0.61 -0.1 2,087,693 - CA264_08935 0.61 -0.7 2,087,800 + CA264_08935 0.74 +0.1 2,087,801 - CA264_08935 0.74 +0.9 2,087,801 - CA264_08935 0.74 +0.1 2,087,801 - CA264_08935 0.74 +0.0 2,087,887 - CA264_08935 0.84 +0.7 2,087,930 - CA264_08935 0.89 +0.2 2,087,932 - CA264_08935 0.89 -0.1 2,087,932 - CA264_08935 0.89 +0.2 2,088,023 - -1.9 2,088,023 - +0.5 2,088,076 + -0.7 2,088,076 + -0.5 2,088,077 - -0.0 2,088,096 + -0.3 2,088,096 + -0.7 2,088,098 + +0.5 2,088,102 + -0.7 2,088,102 + -0.3 2,088,375 + CA264_08940 0.21 -1.3 2,088,376 - CA264_08940 0.21 -1.3 2,088,667 + CA264_08940 0.54 -2.4 2,088,698 - CA264_08940 0.58 -0.5 2,088,702 + CA264_08940 0.58 -1.6 2,088,897 + CA264_08940 0.80 -0.8 2,088,934 + CA264_08940 0.85 -2.6 2,089,014 + -0.9 2,089,059 + +0.5 2,089,060 - -1.6 2,089,088 + +1.0 2,089,089 - +0.1 2,089,098 - +0.2 2,089,120 + -0.2 2,089,345 + CA264_08945 0.13 +0.3 2,089,377 - CA264_08945 0.17 -1.6 2,089,380 + CA264_08945 0.18 +1.4 2,089,381 - CA264_08945 0.18 +0.5 2,089,381 - CA264_08945 0.18 +0.4 2,089,554 + CA264_08945 0.43 +0.0 2,089,594 - CA264_08945 0.49 -0.5 2,089,844 + CA264_08945 0.86 -0.7 2,089,844 + CA264_08945 0.86 +0.5 2,089,847 + CA264_08945 0.86 +0.6 2,089,848 - CA264_08945 0.87 +1.2 2,089,948 + +0.7 2,089,949 - -1.3 2,089,949 - -0.1 2,089,953 + +0.6 2,089,959 + +0.0 2,089,960 - +0.2 2,090,050 + +0.7
Or see this region's nucleotide sequence