Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08705 and CA264_08710 are separated by 555 nucleotides CA264_08710 and CA264_08715 are separated by 37 nucleotides
CA264_08705: CA264_08705 - SusD/RagB family nutrient-binding outer membrane lipoprotein, at 2,022,890 to 2,024,308
_08705
CA264_08710: CA264_08710 - sugar kinase, at 2,024,864 to 2,026,114
_08710
CA264_08715: CA264_08715 - glucosamine-6-phosphate deaminase, at 2,026,152 to 2,028,116
_08715
Position (kb)
2024
2025
2026
2027 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2023.949 kb on + strand, within CA264_08705 at 2023.952 kb on + strand, within CA264_08705 at 2023.952 kb on + strand, within CA264_08705 at 2023.953 kb on - strand, within CA264_08705 at 2024.042 kb on + strand, within CA264_08705 at 2024.043 kb on - strand, within CA264_08705 at 2024.318 kb on - strand at 2024.342 kb on - strand at 2024.348 kb on + strand at 2024.349 kb on - strand at 2024.376 kb on - strand at 2024.379 kb on - strand at 2024.404 kb on - strand at 2024.404 kb on - strand at 2024.463 kb on - strand at 2024.498 kb on - strand at 2024.656 kb on - strand at 2024.656 kb on - strand at 2024.721 kb on + strand at 2024.859 kb on - strand at 2024.946 kb on + strand at 2024.965 kb on - strand at 2025.037 kb on - strand, within CA264_08710 at 2025.127 kb on + strand, within CA264_08710 at 2025.166 kb on + strand, within CA264_08710 at 2025.167 kb on - strand, within CA264_08710 at 2025.225 kb on - strand, within CA264_08710 at 2025.230 kb on + strand, within CA264_08710 at 2025.231 kb on - strand, within CA264_08710 at 2025.322 kb on - strand, within CA264_08710 at 2025.383 kb on + strand, within CA264_08710 at 2025.578 kb on - strand, within CA264_08710 at 2025.883 kb on - strand, within CA264_08710 at 2025.883 kb on - strand, within CA264_08710 at 2025.887 kb on - strand, within CA264_08710 at 2025.911 kb on - strand, within CA264_08710 at 2025.914 kb on - strand, within CA264_08710 at 2025.984 kb on - strand, within CA264_08710 at 2026.018 kb on - strand at 2026.018 kb on - strand at 2026.144 kb on - strand at 2026.144 kb on - strand at 2026.144 kb on - strand at 2026.145 kb on + strand at 2026.342 kb on + strand at 2026.380 kb on + strand, within CA264_08715 at 2026.381 kb on - strand, within CA264_08715 at 2026.381 kb on - strand, within CA264_08715 at 2026.418 kb on + strand, within CA264_08715 at 2026.456 kb on - strand, within CA264_08715 at 2026.456 kb on - strand, within CA264_08715 at 2026.458 kb on + strand, within CA264_08715 at 2026.488 kb on + strand, within CA264_08715 at 2026.591 kb on - strand, within CA264_08715 at 2026.602 kb on + strand, within CA264_08715 at 2026.602 kb on + strand, within CA264_08715 at 2026.603 kb on - strand, within CA264_08715 at 2026.615 kb on + strand, within CA264_08715 at 2026.624 kb on + strand, within CA264_08715 at 2026.625 kb on - strand, within CA264_08715 at 2026.680 kb on - strand, within CA264_08715 at 2026.920 kb on + strand, within CA264_08715
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,023,949 + CA264_08705 0.75 -1.5 2,023,952 + CA264_08705 0.75 +0.5 2,023,952 + CA264_08705 0.75 +0.7 2,023,953 - CA264_08705 0.75 +0.7 2,024,042 + CA264_08705 0.81 +1.1 2,024,043 - CA264_08705 0.81 -0.2 2,024,318 - +0.7 2,024,342 - +0.0 2,024,348 + -3.2 2,024,349 - +0.6 2,024,376 - +0.9 2,024,379 - +0.4 2,024,404 - +1.5 2,024,404 - -0.1 2,024,463 - +0.4 2,024,498 - -1.0 2,024,656 - -0.6 2,024,656 - -0.4 2,024,721 + -0.6 2,024,859 - -0.1 2,024,946 + -2.7 2,024,965 - -0.5 2,025,037 - CA264_08710 0.14 -1.8 2,025,127 + CA264_08710 0.21 -3.9 2,025,166 + CA264_08710 0.24 -0.6 2,025,167 - CA264_08710 0.24 +1.5 2,025,225 - CA264_08710 0.29 -1.2 2,025,230 + CA264_08710 0.29 -1.9 2,025,231 - CA264_08710 0.29 +0.4 2,025,322 - CA264_08710 0.37 -1.7 2,025,383 + CA264_08710 0.41 -2.1 2,025,578 - CA264_08710 0.57 -1.4 2,025,883 - CA264_08710 0.81 -2.1 2,025,883 - CA264_08710 0.81 -0.6 2,025,887 - CA264_08710 0.82 -3.1 2,025,911 - CA264_08710 0.84 -1.0 2,025,914 - CA264_08710 0.84 -1.1 2,025,984 - CA264_08710 0.90 -3.2 2,026,018 - -1.2 2,026,018 - -1.4 2,026,144 - +0.3 2,026,144 - +0.7 2,026,144 - -1.0 2,026,145 + -1.6 2,026,342 + +0.2 2,026,380 + CA264_08715 0.12 -0.6 2,026,381 - CA264_08715 0.12 -1.4 2,026,381 - CA264_08715 0.12 -1.2 2,026,418 + CA264_08715 0.14 -0.1 2,026,456 - CA264_08715 0.15 -0.1 2,026,456 - CA264_08715 0.15 -1.0 2,026,458 + CA264_08715 0.16 -0.4 2,026,488 + CA264_08715 0.17 -1.0 2,026,591 - CA264_08715 0.22 -0.4 2,026,602 + CA264_08715 0.23 -0.7 2,026,602 + CA264_08715 0.23 -0.7 2,026,603 - CA264_08715 0.23 -0.1 2,026,615 + CA264_08715 0.24 -1.2 2,026,624 + CA264_08715 0.24 -1.0 2,026,625 - CA264_08715 0.24 -2.2 2,026,680 - CA264_08715 0.27 +0.3 2,026,920 + CA264_08715 0.39 -1.6
Or see this region's nucleotide sequence